KEGG   Trichoplax adhaerens (placozoan): TRIADDRAFT_27020
Entry
TRIADDRAFT_27020  CDS       T01069                                 
Name
(RefSeq) hypothetical protein
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
tad  Trichoplax adhaerens (placozoan)
Pathway
tad03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TRIADDRAFT_27020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tad03019]
    TRIADDRAFT_27020
Messenger RNA biogenesis [BR:tad03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     TRIADDRAFT_27020
SSDB
Motif
Pfam: DNA_pol_A_exo1 PMC2NT HRDC
Other DBs
NCBI-GeneID: 6754954
NCBI-ProteinID: XP_002113380
JGI: 27020
UniProt: B3RZJ7
LinkDB
AA seq 535 aa
LIKATQCGNKLPTAGDDYDFYASYSSFQQFMQEAGDRLLSLNGALIRHLGLNCRWPLQSD
AFDIDDRTDSLIDANDAILEKVDLLIDEAQGIKRNVEPMIPANSNQNYPKIASWNTKRDK
VRAMAENFKFLHAKNIQRPQLQFKTKIDNSSSPFIPKLKCKPNALVPLPKEYMEDEQTAR
TDKFSSKVIKLDPEAEDDNVDGQESRHPYRYEIKHLQPMDWQLKSKKPMMYLPLDETPLN
VITEKDELKDLLETLKSVTEFAVDLEHHSYRSYQGFVCLMQISTRDADYIVDTLALRSEL
WTLNEVFSDPKIIKILHGADSDIIWLQRDFAIYVVNMFDTGQAARLLQFPRFSLSYLLLK
YCNVTANKGLQLADWRIRPLPQEMVQYAREDTHYLLYIFDVLTNELMNASTSVDLLKSNF
DRSKKICLRTYEKPVFNKKSYLNLLYKHKGRFNHQQNYAFAKLYSWRDSVARDNDESANF
VLPNHMLLQIAENLPREPQGILACCNPIPTLVRQYIGDIHQIIKKARERSINEVM
NT seq 1608 nt   +upstreamnt  +downstreamnt
ctgatcaaagcaacacaatgtggcaataagttaccaactgctggtgatgactacgatttt
tacgcttcttattcatcttttcaacaattcatgcaagaagctggagatcgtttactctcc
ctcaatggagcattgattcgccacttaggccttaattgtagatggccacttcagtcagat
gcttttgatattgatgacagaaccgactcgttaatagacgctaatgatgcaatattagaa
aaagtcgatctactaatagatgaagctcaaggtatcaaaagaaatgttgaaccgatgatt
cctgccaactctaatcaaaattatcctaaaatcgctagttggaacacaaaaagggataag
gtcagagccatggcggaaaacttcaaatttctacatgctaagaatattcaaagacctcaa
ctacagttcaaaacgaaaatcgataattcaagctcaccctttataccaaaactgaaatgc
aagccgaatgcccttgtgccattacctaaagagtacatggaagatgaacaaactgcacgc
accgacaaattctcttcgaaagtgataaaactagatccggaagctgaagacgataacgta
gatggccaagaatccagacacccctatcggtacgaaattaaacatttacaacctatggat
tggcagctgaaatcaaaaaagcctatgatgtatcttccacttgatgaaaccccgttgaat
gtaattaccgaaaaggatgaattaaaagatttgttggaaacattaaaatctgttactgaa
tttgctgttgatttggagcatcatagttataggtcatatcaaggctttgtatgtttaatg
caaatatccacacgtgatgcggattacatagtcgatactcttgcacttcgaagtgaatta
tggacattaaacgaagttttctcggatccaaagattatcaagattttgcatggagctgac
agtgatattatctggctgcaacgagattttgctatctacgtggttaacatgtttgatact
gggcaagcagctcgacttctacagtttcctcgcttttctttatcatatttacttttaaaa
tactgtaatgtaactgcaaataagggattacagttagcagattggagaattaggcctttg
cctcaagagatggtccaatacgcacgagaagatacccattacttattgtacatatttgat
gtccttacaaatgaattaatgaatgcttcgacgtcagtggatttgttaaaatcaaatttc
gacagaagcaagaagatttgtttacgcacttacgaaaagccggtttttaataaaaagtct
tatttgaatttattatataagcataaaggtcgctttaatcatcagcaaaattatgcattt
gcaaagctgtattcttggcgcgatagtgttgctcgagataatgatgagagtgcaaacttt
gtccttccaaatcatatgctgctacaaattgcagaaaatttaccaagagagcctcaggga
atattagcttgctgtaacccaattccgactttagtgagacagtacataggagatattcat
cagattatcaaaaaagcccgagaacgaagtatcaatgaagtaatgtaa

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