Trichoplax adhaerens (placozoan): TRIADDRAFT_27976
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Entry
TRIADDRAFT_27976 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TRIADDRAFT_27976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tad03400
]
TRIADDRAFT_27976
DNA repair and recombination proteins [BR:
tad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
TRIADDRAFT_27976
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
6755697
NCBI-ProteinID:
XP_002114169
JGI:
27976
UniProt:
B3S1V8
LinkDB
All DBs
AA seq
687 aa
AA seq
DB search
LCNLHGRIGKSTGYKLSELKDLLSGQTLIVGRKEVEIISSISDTDWATGKCFRTATNTTN
VIPQIARQKFTNKFSSPLKSIENMPTKDVKITHESPRHDPNAPDALVMPRPSVDHQRNFN
TNKLCVVDVVVDPYISRRLRPHQRDGVIFLYECVMGMRDFSGFGAILADEMGLGKSLQCI
ALIWTLYKQGMYGGKAPIKRILLVTPGSLVQNWSREFRKWLGIERFKVFPVSSDKRVEEF
IKYPQYPLMIISYEMFVRSCDTLKGIKFDLLICDEGHRLKNSSNKTFALISSVQTRRRVL
VTGTPIQNDLQEFYAIVEFCNPGILGSEAAFRRIYEDPIAKSRLPGCNKKEKNLGESRAI
ELSRLTKLFCLRRTQEVIIHHLPPKVEYVIFCRTAPLQVLIYRHLLSSRLFKECISAVES
NYCRHFMCINALRKVCNEPNLIYEAVKDAESHLIDDEIGKSIEEEHTLLYAGIQSLYPPN
YSPDTFTTEHSGKLAVLSNLLDWIYQNSPKEKVVVVSNFTRTLDVLQKMCKSKNYRYVRL
DGSTPTSKRHTIVENFNSSYSKTFVFLLSSKAGGTGLNLIGASRLVLYDIDWNPANDLQA
MARIWRDGQKRDVYIYRLVTTGTIEEKIFQRQVMKHDLSGAVMDTRESGRSQFTRKDLHN
LFSLREDIVCDTHKLLGCNCCLEGTVC
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
ctatgtaatttacatggcaggattggaaagagtacaggttacaaattatcagaattgaaa
gatcttctgtctggtcagacgttgatagttggaagaaaggaggttgagataattagttca
atcagcgataccgattgggcaactggaaagtgcttccgaactgctactaacactaccaat
gtaataccgcaaattgccagacaaaagtttacaaataaattctcatctcctttgaaatct
atcgaaaatatgcccacgaaagatgtaaaaattactcacgaaagtcctagacacgaccca
aatgctccggatgctcttgtaatgccacgacctagtgtcgaccatcagcgcaacttcaat
acaaataagctctgtgtagtcgatgttgttgttgatccatacataagtcgtcgtttacga
cctcatcaacgcgatggtgtcatatttctatatgaatgtgttatgggaatgcgtgatttt
tctggctttggtgctatattagcagatgaaatgggtcttggaaaatcgttacagtgcatt
gcattgatatggacactttataagcaagggatgtacggtggtaaagcaccaattaagcgg
attcttcttgttactcctggtagcttagtacagaattggtctcgtgaatttcgaaaatgg
ttaggcattgaacgatttaaggtgtttcctgtcagttctgataagagagttgaggaattt
atcaaatatccccaatatccactgatgattattagctacgaaatgtttgtacgctcttgc
gatacactgaaaggcatcaaatttgatcttctgatatgtgatgaagggcatcgccttaaa
aactcttccaataaaacttttgcgttgatatcaagcgtgcaaacacgacgtcgagttctt
gttactggcactcctatacagaatgacttacaggaattttatgccattgtagaattttgt
aacccaggaattttagggagtgaggccgcatttcgtcgtatttacgaagatccgatagct
aagtcgagattgccaggatgcaataaaaaggagaaaaacctcggtgaaagtcgagctata
gagctatccagattaacaaagcttttttgcctcagacgcactcaagaagtcattatccat
catcttccacctaaagtggaatatgtgatattttgcagaaccgcaccactacaagtcctt
atatatcgacatctgctcagttctcgcctatttaaagaatgcataagcgcagttgaatcg
aattattgcagacatttcatgtgtattaacgctcttagaaaagtttgtaatgagccgaac
ttaatttatgaagcagtcaaggatgctgaatcacatctgattgatgacgagattggtaaa
tctattgaggaggagcacacacttctatacgctggaattcaatcgttatatccacccaac
tattctcctgatacttttactaccgagcattcaggcaaattagccgtattgagtaattta
ctggattggatataccaaaattcgcctaaagaaaaagtagttgttgtttctaattttacc
agaaccttagatgtactacagaaaatgtgtaaaagtaaaaattatcgctacgttcgacta
gatggatcaacgccaacttccaaaaggcataccattgttgaaaattttaattcatcttat
agtaaaacatttgtttttttgttaagttcgaaagccggtggtactggactaaatctaatt
ggtgcttcgcgattagtattatatgatattgactggaatcctgctaatgacctccaggca
atggccaggatttggagagatggtcaaaaaagagatgtttatatctatcgactagttaca
acgggtactatagaagaaaaaatttttcaacgacaagttatgaaacatgatttaagcggg
gcagtgatggatacgagagagtccggaagaagtcaatttaccagaaaagatttacataat
ctatttagcttgcgagaggatatcgtgtgcgatacacataaactacttggctgcaattgc
tgcctcgaaggaacggtctgctag
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