Trichoplax adhaerens (placozoan): TRIADDRAFT_28268
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Entry
TRIADDRAFT_28268 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03410
Base excision repair
tad03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TRIADDRAFT_28268
03450 Non-homologous end-joining
TRIADDRAFT_28268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tad03400
]
TRIADDRAFT_28268
Enzymes [BR:
tad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TRIADDRAFT_28268
DNA repair and recombination proteins [BR:
tad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
TRIADDRAFT_28268
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
TRIADDRAFT_28268
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
NTP_transf_2
PheRS_DBD1
Motif
Other DBs
NCBI-GeneID:
6755934
NCBI-ProteinID:
XP_002114551
JGI:
28268
UniProt:
B3S2V4
LinkDB
All DBs
AA seq
342 aa
AA seq
DB search
WACARPSSLPVKNRNKHITDILEILQKKYENLGDQWRVKGYTKAISSIKNYPREITTREE
AEAIPNIGKRLADKIWEIISCGHLRKLDYMDNDVQTALNVFTKIWGAGPATAHNWIAQGL
YTLDDIRAKAKLNYHQSIGLKYYDDFNERIPRAEVVEIEAVIREEATAIELGLEVITCGS
YRREKPTCGDVDILISHPNGRSHQGVYHKLLRRLQAKDFLTEILVNQDVDIDHQKLLGVC
KLPEEGRKYRRLDIIVVPYREWACSLLYFTGSGHFNRSMRLLARKKRMHLSEHAISVGVL
RKVTACSGNQKLTRGTPVPTKCEADIFALLGLDYLEPKDRDC
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
tgggcgtgtgcacgaccatcaagtttgcccgtgaaaaatcgaaacaagcatataacagat
atcctagagatcttacaaaaaaaatatgaaaatttaggagatcaatggcgtgtaaaagga
tacactaaagcaatttcctcaattaagaattatcctagagaaattactacccgagaggaa
gcagaggcaattccaaatatcggaaaacgtctagcagataaaatatgggaaattattagt
tgtggtcatcttagaaaattagattacatggataatgatgtacagactgctctaaatgtc
tttactaagatatggggagcaggtccagctactgcgcacaactggattgctcaaggcttg
tatacactggatgacatacgggccaaagcaaaactaaattaccatcaaagcattggatta
aaatactacgatgatttcaatgaaaggattcctcgagctgaagtggtagagattgaagct
gtaattcgagaagaagctacagctattgaacttggcctagaagtgataacatgcggctct
tatcgccgtgagaagcctacatgcggtgacgtagatattttgatttcacatccaaatggc
cgctctcatcaaggtgtttatcataagctgctgcggcggttacaagctaaagatttctta
actgaaatcttagttaatcaagacgtcgatatcgatcatcaaaagttattaggcgtttgt
aaattgccagaggagggtagaaagtatcgccgcttggatattattgttgtcccttaccgt
gaatgggcttgttctcttttatactttactggatctgggcactttaatcgttcaatgagg
ttacttgctcggaaaaagagaatgcatctctctgaacatgcaattagcgttggagtatta
cgtaaggtgactgcatgctctggaaatcaaaaactaactcgtggtacccctgtacccacg
aaatgcgaagcagacatttttgctttactgggactcgactacttagagccaaaagatcga
gactgttag
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