Trichoplax adhaerens (placozoan): TRIADDRAFT_28707
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Entry
TRIADDRAFT_28707 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03030
DNA replication
tad03410
Base excision repair
tad03420
Nucleotide excision repair
tad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TRIADDRAFT_28707
03410 Base excision repair
TRIADDRAFT_28707
03420 Nucleotide excision repair
TRIADDRAFT_28707
03430 Mismatch repair
TRIADDRAFT_28707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tad03032
]
TRIADDRAFT_28707
03036 Chromosome and associated proteins [BR:
tad03036
]
TRIADDRAFT_28707
03400 DNA repair and recombination proteins [BR:
tad03400
]
TRIADDRAFT_28707
DNA replication proteins [BR:
tad03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
TRIADDRAFT_28707
DNA Replication Termination Factors
ELG1-RFC complex
TRIADDRAFT_28707
Chromosome and associated proteins [BR:
tad03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
TRIADDRAFT_28707
DNA repair and recombination proteins [BR:
tad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
TRIADDRAFT_28707
Check point factors
HRAD17(Rad24)-RFC complex
TRIADDRAFT_28707
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
RuvB_N
RCF1-5-like_lid
AAA_11
Viral_helicase1
Mg_chelatase
DEAD
AAA_19
AAA_24
MipZ
ABC_tran
Rad17
nSTAND3
NTPase_1
AAA_30
ATPase_2
AAA_18
AAA_assoc_2
AAA_28
SLFN-g3_helicase
RNA_helicase
AAA_5
MeaB
MCM
AAA_25
Motif
Other DBs
NCBI-GeneID:
6756397
NCBI-ProteinID:
XP_002115018
JGI:
28707
UniProt:
B3S4I8
LinkDB
All DBs
AA seq
315 aa
AA seq
DB search
IEKYRPKQLDEVVGNEDTISRLEVFAKEGNLPNIVIAGPPGTGKTTSILCIARQLLGTSM
KDAVLELNASNDRGIDVVRNKIKMFAQKKVTLPLGKHKIIILDEADSMTDGAQQALRRTM
EIYSKTTRFALACNTSEKIIEPIQSRCAVLRFTRLNDSQILARLMEVCRQESVIATNDGL
EAVIFTAQGDMRQALNNLQSTYAGFGHVNSENVFKVCDEPHPLLIKQMIQASIECNIDEA
YKVLSHLWQLGYSPIDIITNIFRVCKNYDMPEYLKLEFIKEIGFTHMRIVEGIDSLLQLS
GLLSRMCIKSLKNTG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
attgaaaaatatcgtccaaaacaattggatgaggtcgttggtaacgaagatactattagc
cgactggaggtatttgcaaaggaaggtaatttgcctaatattgtaattgcgggacctcct
ggaactggtaaaacaacaagtatattatgcatagctagacagcttcttggaacttcaatg
aaagatgcagtcttagagctaaatgcttcaaatgacagaggtatcgacgtggtgcgtaac
aaaattaagatgtttgcgcaaaagaaggttacattacctcttggcaaacataaaattatt
atattagatgaagcagacagcatgactgatggagcacagcaggcattacgtcggacaatg
gagatctattcgaagaccacgcgatttgctctagcttgtaatacatctgaaaaaattata
gagcctattcaatcgcgatgtgccgttttaaggttcacgagattaaacgactcacaaatc
ttggctagattaatggaagtttgtcggcaagaaagcgttattgctactaacgatggctta
gaagcagtgatatttactgctcagggagacatgagacaggcattaaacaatctacagtca
acatacgctggatttggacacgtaaatagtgagaatgttttcaaagtatgtgatgaacca
catcctttacttataaaacaaatgatacaagcttcgattgaatgcaacattgacgaagct
tataaagtcctatctcacttgtggcagcttgggtattctccaattgatattatcactaat
atctttcgtgtgtgtaaaaattacgatatgcctgaatacttaaagctggaattcataaag
gaaataggatttactcatatgagaattgtggaaggaatagactctttactacaattgtcc
ggattattatcaagaatgtgtataaaaagccttaagaacactggctaa
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