Trichoplax adhaerens (placozoan): TRIADDRAFT_29198
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Entry
TRIADDRAFT_29198 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K14312
nuclear pore complex protein Nup155
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TRIADDRAFT_29198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tad03019
]
TRIADDRAFT_29198
Messenger RNA biogenesis [BR:
tad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TRIADDRAFT_29198
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
6756661
NCBI-ProteinID:
XP_002115448
JGI:
29198
UniProt:
B3S4Y7
LinkDB
All DBs
AA seq
1366 aa
AA seq
DB search
MTHQHASNQALSEASKQLEKHLDQDSHYLDLSRLLNISSGSYTAGISGIGENDYASISAL
PGLQNVPNFANVRRVPLPVELVEQFNHLQYNCLMGLFPEIKRAWLSIDSDIFVWNYEDGS
DVAYFDGLSEYIMCVGLVRPKPGIFQDHIKFLLCLATAVDVVLLGVSFSEATQTAGYPYK
EMHLQPEPLFVLPLDQQIEITSISGTRNGRIFMTTKNCCLFEIEYRDKAGWFTQQCRIVN
HSSSYLYGVSGIYNIFMKVVNLFSTEDSMQQIAIDESRNILYTLSKESTIQVYDLGSNGN
LTSHVVTLNRGAILSQASRSARYIDAGNFAPVVYIAPISKQESLGVQLIAVTKSGVRLYF
VVTSSFSDRPSHIQLVHIRMPPGCTPSVPAIQRPNNINISYYNHGLMLMASSSSDDSDIL
WLTNPDVFPFMKLLKESQCTTAINGHIWAINETKDFDQVANPNLKTVKSDPPAIVSQHAK
PLRQFVILGAQGAYLLDSFRPSELLRCILLKCGRVDQEAVQTYFSMDTINAVVSCLVLAC
SNRPSDQHVTKLAAQAFFCYSDEPRFEFPTSSNITQPGVGSHPGDTKPQPFQQPPSTNVN
QAPSPPESGRPLSTENTLQSAPTDGVPVMKFSLKHDGVYLYLSRILRPVWNTNLTAEVVR
TSTKVEYVTMESQFSSEELLWLCEQVASLKAFIEEHNQLFLSPSLHHHMLNVVKSQAGVR
SDPNVPNRQVIQSQLQQRYKADAVSTEKRSFENMSSLLTGCIECFSLWSIICNHDFSVVM
TNLSKEMKDIILRTKFKDLVLGDGKITNALIAALIDMYLLDNASTDPITDQLRIKCPSLY
SSDDATCSKAYEMLHQAKISTDMKEAELAYRSSLQLFRQVTKHVDVAQVCQQYKNVFFFE
GVIELALTAAEAEDVKEYALNFYKNGDPPNDNIGREAFTKRSHYYKCIVDSLDYLMNAAV
SDASRSPLGSVSSKRANTNLNTLTVNEAETMMEKVLSDSFASGDELIHVTLYDWLIANNL
HDRLLEVSSVYLEAYLKRATTSQPSNLVAMDLLWKYYEKNNKYQSASLILSKLAERTSTD
ITLQKRVEYLSRAIISAKSASFPGASGSAGDFLHELEEKLEVARIQSKIHDALVLLQQEK
GHLQEYTEALRELNGGIFDISTLYKDFASRFDLAECKLAILYTAGHNDVNLVETVWKDII
DYEIHRSKMLSEGAKMSSISNRLAEIGNLYAHSEQYFPLLYILTLLEKRSCELNWDPRLA
YETMLRIDISRKTMLTAYNLLFRAKDPFWQAVKKPLHLFLVIHNLITSSIEAKDLVPDDK
REFCISALSSVDSYLVELESMSLSSIAVQNMISRYRSLKAQLSRLT
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgacccaccaacatgccagtaatcaagcgttaagtgaagcttccaaacagttggagaaa
catctcgatcaggatagtcattatttggatctttctcgcttactcaatatatcttctggc
tcatatacggctggtataagtggaattggtgaaaatgactatgcttccatatcggcctta
ccagggctacagaatgtaccgaactttgccaatgttcgcagggtaccgctgccagtagag
ctagtagaacaattcaatcatttacaatataattgtctaatgggtctatttcctgaaatt
aaacgagcttggttatctatcgatagtgatatctttgtatggaattacgaagatgggagc
gatgttgcttattttgatggtctcagtgaatacataatgtgtgttggactagttagaccc
aaaccaggaatatttcaagatcatatcaaattcctgttatgtttagctactgctgtcgat
gttgttctactaggggttagcttttcggaagctacacaaacggccggatatccttataaa
gagatgcatcttcagcccgagccactattcgtattgccattagatcagcaaattgagatt
acatccatcagtggtactcgaaatggacgaatattcatgaccaccaagaactgttgtcta
ttcgaaatagaatatcgagataaagccggttggtttacccagcagtgtcgtattgtaaac
cattccagtagttacctttacggagtatctggcatctataatattttcatgaaggttgtc
aacttattttctacagaagattcaatgcaacagattgccatagatgaaagtagaaacatt
ttatatacattatctaaagaaagcactatacaggtttatgaccttggaagtaacgggaat
ctgactagtcatgttgttacgttaaatcgcggagctattttatctcaagcttcaagatcc
gcaaggtacatagatgccggtaactttgctccggttgtatatattgctccgatcagtaaa
caagagtctcttggcgtgcagcttatagccgtaactaaatcaggtgttagactatacttt
gttgtcactagctcatttagtgacagaccatctcacattcaactagttcatattcgcatg
cctcctggttgcactccgtcagttcctgcaatacaacgccccaataatatcaatatttca
tactataaccatggattgatgctcatggcttctagcagttccgatgattctgacatatta
tggttgactaatccagatgtgtttccctttatgaagttacttaaagagagtcagtgtaca
actgcaattaacgggcatatatgggctatcaatgaaactaaagactttgatcaggttgca
aatcccaatctgaaaaccgtaaagtcagatcctccagcgattgttagtcaacatgctaaa
ccattaagacaattcgtcattttaggagctcagggtgcctaccttcttgatagctttcga
ccgtccgaattactgcgttgtatcttgctaaagtgtggaagagtggatcaagaagctgta
caaacatactttagtatggacacgatcaatgcagtggtatcatgcctcgttttggcgtgc
tctaatcgcccatctgatcagcatgttaccaaacttgctgcgcaagcttttttctgttat
agtgatgagccgagattcgaattcccaactagttcaaacattacgcaacccggagttggc
agtcatcctggtgatacgaagccacaaccttttcaacaaccaccttcaacgaatgttaat
caagcaccttcgccaccagaatctggtcggccattatcgactgaaaacacgttgcagtcg
gcccccactgatggagtacctgttatgaaattctctttaaagcatgatggagtatattta
tatctatctcgtattctccgacctgtgtggaatacgaatctaactgcggaagtcgttcga
acctcaactaaggttgaatatgttaccatggaaagtcaattctcatctgaagaattatta
tggctatgtgagcaagtagctagcctaaaagcgtttattgaggagcataatcagctcttt
cttagtccatcccttcatcatcatatgctaaatgttgtaaaatctcaagctggcgtcaga
tcagacccaaatgttcccaaccgacaggtgatacaatcgcaactgcaacaacgctataaa
gctgatgctgtatctactgaaaaaagatcctttgagaacatgagttctcttctgaccgga
tgtatagagtgcttttctttatggagtattatatgcaaccacgatttctctgttgtaatg
actaacttgagcaaggaaatgaaggacattattttgagaacaaagtttaaagatctagtt
ctgggcgatggaaagataacgaatgctctaattgctgcgttaattgatatgtacttactg
gataacgcttcaacggatcccattaccgatcaattacgtataaaatgcccgtcattgtac
agcagtgatgatgcaacatgttctaaagcatatgagatgttgcaccaagctaaaatatct
acggatatgaaggaagctgagttggcctataggtcatctttacagctatttcgtcaagta
actaaacatgtcgacgtggcacaggtctgccaacagtacaaaaatgtatttttcttcgaa
ggtgtgattgaattagctctaacagctgctgaagcagaggatgtcaaggaatatgcttta
aatttttataagaatggcgatcctcctaacgataacataggtagagaggcttttaccaaa
aggagccactactacaagtgtattgtagattcattggattacttgatgaatgcggcagta
agcgatgctagtcggtcacctttaggttcagtatcttcgaaaagagcgaatacgaattta
aatacgttaactgtaaatgaggccgaaacaatgatggaaaaggttctcagtgattcgttc
gcttctggtgatgaactgattcatgtaactttatacgattggttgattgcaaataatttg
catgacaggctgttagaagtttcgtccgtctatttagaggcctatttaaaacgtgcaaca
acctcccagccttcaaatctagttgcaatggatctattatggaagtattacgaaaagaat
aataaatatcagtcagcttcgttaatcttaagcaaattagcagaaagaacaagcacggat
attacattgcaaaagcgagttgaatacttatctcgagcaattattagcgcaaaaagcgcg
agctttcctggagctagtggaagtgctggggattttcttcacgaattagaagagaaatta
gaggtggctcgtattcagtcgaaaattcacgatgcgctagtgttgcttcagcaagaaaaa
ggccacttacaggaatatactgaagctttacgggaattaaatggagggatatttgatatt
agtactctgtataaggactttgcaagtagatttgatctcgctgaatgcaaactcgctata
ctatacactgctggccataatgatgtaaatcttgtagagactgtatggaaagacattata
gactatgaaattcatagatcaaaaatgttatcagaaggagctaaaatgagctccatttcc
aatagattagctgaaattggcaacctatatgctcattcggagcagtattttccattactg
tacatattgacattgttggagaaacggagttgcgaattgaattgggatccaaggcttgca
tatgaaactatgttacgaattgatatatctcggaagaccatgctaactgcttataattta
ctttttagagcaaaagatcctttttggcaagctgtgaaaaagcctttacatctgttttta
gttatacataatttaatcacgtcctcgatcgaagccaaagatttagtccccgatgataag
cgagaattttgcatttctgcgttaagttctgtggatagttacttagtcgaactggagtca
atgagcttaagtagtatagctgtacaaaatatgatcagtcgatatcgatctctgaaagcg
caattatcgcgtttaacttaa
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integrated database retrieval system