Trichoplax adhaerens (placozoan): TRIADDRAFT_30218
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Entry
TRIADDRAFT_30218 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
tad
Trichoplax adhaerens (placozoan)
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tad03009
]
TRIADDRAFT_30218
Enzymes [BR:
tad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TRIADDRAFT_30218
Ribosome biogenesis [BR:
tad03009
]
Eukaryotic type
Pre-60S particles
Helicases
TRIADDRAFT_30218
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SBF_like
Motif
Other DBs
NCBI-GeneID:
6756981
NCBI-ProteinID:
XP_002115907
JGI:
30218
UniProt:
B3S6H2
LinkDB
All DBs
AA seq
504 aa
AA seq
DB search
MNPINGHASWNSIESLLLPSTLVTIQSLGFQTMTPVQSATIPAFLSYKDVVVEAVTGSGK
TLAFVIPILQMLSKRDTKLRKYDVGAIILTPTRELAIQIHTVIQPFLDNMQDLSQILFIG
GNNTVNDAKMWKEYGGNIIIATPGRFEDIIDRRKTDFNIAGHIKALEVLVLDEADRLLDL
GFEESLNTIFSYLPKQRRTGLFSATQTEKLEQLIRAGLRNPVRITVREKNIVKQVNQKTP
AALENYYMLCGFDTKFSNLIHFLKERKNLKHMTFFSTCACVEYFGNVLKCLLPDMCILCM
HGKMKKKRTLIFEKFRKMSRGLLVCTDLLARGVDIPEVHWVIQYDVPNKTNAFVHRCGRT
ARIGNKGNAIIFLNPNEESYVQFLSLNQKVPLARFTSNHEVADYTQKLQELSKSDREIYE
KGIRAFVSFVSSYRKHECSYILRVKELDLCSMARGFGLLRMPKMPELRNVNTSLFETVDI
DVDAIAYKNKAKEKQRQIALKNQR
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctattaatgggcatgcatcgtggaattccattgaatctctgttactacctagt
actcttgtaacgattcaatctttgggctttcaaacgatgacacccgttcagtcagcaacg
ataccggcgttcctatcgtataaagacgttgtcgttgaagctgtcactggatctggtaaa
acacttgcatttgttatacctatattgcaaatgttatccaaaagagatacgaaactaagg
aaatatgatgtaggtgctataattctgacaccaacaagagaactcgctattcaaattcat
acagttatacaaccatttttagacaatatgcaagatcttagtcaaattctcttcattggt
ggaaacaataccgttaatgatgcaaaaatgtggaaagaatatggaggcaatataataatt
gctacacctggaagatttgaggatattatagataggcgcaaaacggattttaatattgct
ggccacattaaagctctggaagttttggttctagatgaagcagataggcttttagatctg
ggattcgaagagagtcttaatacaatttttagttacttgcctaagcaaaggagaacgggg
ttattttctgctactcaaactgaaaagctagaacagcttattagagccgggttaaggaat
ccagttcgtattactgttcgtgagaaaaatatcgtgaagcaggtaaaccaaaaaactcct
gccgcacttgaaaattactacatgttatgtgggtttgatacaaaattctcaaatctgatt
cattttctaaaagaaagaaagaatttaaaacatatgaccttttttagcacatgtgcttgt
gttgaatattttggtaatgttttaaaatgtttactaccggatatgtgcattctttgtatg
cacggtaaaatgaagaagaagaggacactaatatttgagaagtttcgcaaaatgtctagg
ggactccttgtttgcacagatttactcgcgagaggtgtagatatcccagaagtgcattgg
gttattcaatatgatgttcccaacaaaactaatgcttttgttcatcgctgtggccgcact
gcaagaattggaaataaaggaaatgctataatatttttaaatccgaatgaagaatcctat
gttcagtttttatcgctaaatcagaaggtaccgcttgcacgatttacatcaaatcatgaa
gtagcagattatactcagaaattgcaagaattatctaaaagtgatagagaaatatatgaa
aagggaataagggcgtttgtatcttttgtatcatcttatcgtaagcacgaatgcagttat
attttaagagtgaaagagctcgatctttgttcaatggcacgcggttttggcttacttcgc
atgccaaagatgccagagttacgcaacgttaacaccagcctattcgaaactgtcgatatt
gacgttgatgccatagcttataaaaacaaggctaaagaaaaacaaagacaaattgctcta
aaaaatcagcgttag
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