Trichoplax adhaerens (placozoan): TRIADDRAFT_30805
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Entry
TRIADDRAFT_30805 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TRIADDRAFT_30805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tad03009
]
TRIADDRAFT_30805
Ribosome biogenesis [BR:
tad03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
TRIADDRAFT_30805
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_C
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_LRRK2
WDR54
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_NWD2_C
KNTC1_N
Beta-prop_DCAF12
Beta-prop_VPS8
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
6757685
NCBI-ProteinID:
XP_002116473
JGI:
30805
UniProt:
B3S863
LinkDB
All DBs
AA seq
506 aa
AA seq
DB search
MADFKRIPIKKFSKANVEESSESSYWMGYKFPIVAKEHSAISCIDFSPVLPHHYAVTCSA
KVQLYDCASNQVYKAISRFHDSALCGTFRYDGKLITAGSGDGLVQVFDTHSRTVLRQLHG
HKRAAHVARFAMNNLHIISASDDKLVRCWDLPTGKEVAIFDEHTDYIRAGDVSRVSSDVW
VTGSYDHTLKLWDRRTDKSSMTIDHGAPVEAVLIYPSGSICISAGSNYIKVWDLIGGGRL
LMGVTNHQKTITCLCLDNSGQRLLSGSLDRHVKIYDIKDYKVVHSMDYSSPITSLGISPD
DSHLVVGMSDGLLSIKERPRHKQELPKFKWRPKGRTVRYFNSRKSGPSKDAVIVAEKKLT
RLPLHDKLLRQFKYTEALDSVLKKSSNHPPVIVSVIQELIRRDGLPIALSGRDEDALLPV
LYFIKKNISNPRYSSLVSDVANIVFDIYSPILGQSSKVDNLFLQIKDKIHEETRLHESFG
KLLGVIDMMLTANNTSANSISAAPLT
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggcggactttaaaaggattcctattaaaaaattctctaaagccaatgttgaagaaagc
agtgaatcaagctattggatgggatataagttccctatagtggccaaagaacattcagca
atatcatgtatcgatttttcacctgtcctaccgcatcactacgctgttacttgttccgca
aaggtgcaattgtacgattgtgcaagtaatcaagtttacaaagccatttcgaggtttcat
gactctgccttatgcggtacatttcgttacgatggcaagttaattacagctggaagcggc
gatggtttagtccaggtatttgatacgcatagtagaacagtattacgacaattacatggt
cataagagagctgctcatgtagcccgtttcgcaatgaacaatctacacattatttcggcc
tcagatgacaaattagttcgttgctgggatttacccactggaaaagaagttgctattttt
gatgaacatacggattacatccgagctggagatgtcagtagagttagcagcgatgtttgg
gtaacaggatcgtatgaccataccttaaagctatgggacaggcgtacagacaagagttcg
atgactatagatcatggagctcctgtagaagcagtgttaatttaccctagtggaagtatt
tgtatctcggcaggaagtaattatatcaaggtatgggaccttattggtggtggacgccta
ctgatgggtgttacaaatcatcaaaagactattacatgcttgtgtttagataacagtggg
caaagacttttatccgggtcgttagatagacacgtcaagatatatgatatcaaagattac
aaagttgtccacagtatggattattcctcacccataacaagtttaggcatatcgcccgat
gatagccatttagtagttggtatgtccgacggactattatctatcaaggaaagaccacga
cataaacaagaattgccaaagtttaaatggagaccaaagggtcgaacagttcgttacttt
aatagtagaaaatcaggcccctcaaaggatgcagttattgtggcggaaaagaaattaacc
cggttgcctttacatgacaaactattgcgtcagtttaagtatactgaggctttggatagc
gttttaaagaaatctagcaatcacccgcctgttattgtcagtgtaatacaagaactaata
aggcgcgatggcttacctatagctttatctgggagagatgaagatgcattattacctgta
ttatattttataaaaaagaatatatctaatccgcgctatagttccctagtttctgatgtt
gctaatattgtatttgatatatactcaccgattttaggccaatcctcgaaagtagataat
ctgtttctacagatcaaagataaaattcatgaagaaacaaggcttcatgaatcgtttgga
aagttattaggggttattgatatgatgctaacagcaaataatacgtcagctaattctata
tcggctgccccattgacgtag
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