Trichoplax adhaerens (placozoan): TRIADDRAFT_32870
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Entry
TRIADDRAFT_32870 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K15172
transcription elongation factor SPT5
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
TRIADDRAFT_32870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tad03021
]
TRIADDRAFT_32870
03019 Messenger RNA biogenesis [BR:
tad03019
]
TRIADDRAFT_32870
Transcription machinery [BR:
tad03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
TRIADDRAFT_32870
RNA polymerase I system
TRIADDRAFT_32870
Messenger RNA biogenesis [BR:
tad03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
TRIADDRAFT_32870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
Spt5-NGN
KOW5_SPT5
KOWx_SPT5
KOW1_SPT5
KOW
KOW2_Spt5
CTD
DUF4744
Motif
Other DBs
NCBI-GeneID:
6758886
NCBI-ProteinID:
XP_002117673
JGI:
32870
UniProt:
B3SBS3
LinkDB
All DBs
AA seq
678 aa
AA seq
DB search
IRDPNLWMVKCKIGEEKSVAITLMNKFISFEAKGTPLQIKSVVAVEGLKGYIYVEAFKQN
HVKQAIEGIGYLRLGYYKQQMVPIKEMTDVLRVVKSIPDLQADGWVRLKRGVYKDDIAKV
IKVDNNRNQVTLKMIPRIDLTRKRGEKQSHDGEKRKRKGRPKAKLFDMDLIRSINGEVTS
EGGYLVFEGNRFREGFMYKTMAMSAINAEGVIPSLTELENFELDPDTVAVSKDLTSILDK
DSPVFVAGDVIKVQNGDLKGLLGEVIAINVDIVTVMPKHEDLKEPLEFRLDQVSKTFKIG
EHVKVVRGKFEGDTGLVVRVNEEDDGLVLFTDLTMHEVKVLTRDVQLCTEISSGIDSSGH
FQLGDLVQIDSQTVGCVVRVLREEMAVLNMHGKVVKVKPQSISKKRDSRNAVALDGDGNA
LHIKDIVKVIDGPHNGQQAEVKHLFRSFVFLYSKMFPDNGGIFVCRSRHLILAGSAKRQD
NGDSRTPFVPQSPRITSPAHPQVQVRHGPGAGRGRGKKGRDPIIGQSIRIFQGPFKNYIG
IAKDATDTTVRVELHSTCKTITVDRSRVVVVKDGKEESAGGVTGITPSYGSQTPMYGSRT
PMYGAQTPLYDGNRTPRYGSQTPMHDGSRTPSYSSAWDPKVPNTPSSRTEDDFDYNTDSV
NPSPQGYHSNPVTPGWIK
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
attagggatccaaatctttggatggtcaagtgcaagattggggaagaaaaatccgttgca
ataaccctcatgaataaatttatttcctttgaagctaaagggacgccattgcaaattaaa
tctgtggtagctgtggaaggattgaaaggttacatttacgtcgaagctttcaagcagaat
catgttaagcaggcaatagaaggaatcggctaccttcgattgggatactataaacaacag
atggtacctattaaggaaatgacggatgttttaagagttgtaaagagtattcctgactta
caagcggatggttgggttcgacttaagcgtggagtgtataaagatgatattgcaaaggtt
attaaagtagataacaaccgaaatcaggtcacgttaaaaatgattcctcgaattgattta
acccgtaaacgtggagagaagcaatctcacgatggtgaaaagcgcaaaagaaaaggaaga
ccaaaagctaaactatttgatatggatttgataaggtcaatcaatggagaagttactagt
gaaggtggatatttagtgtttgaaggaaatcgatttagggagggatttatgtataaaacc
atggccatgtctgctattaatgcggaaggtgtcattcctagtcttactgagttagaaaat
tttgaacttgacccagatacagttgctgtctctaaagatcttacctccattctggacaag
gattcaccagtttttgttgctggtgacgttattaaggtacaaaatggtgacttaaaaggg
ctactcggtgaggtgatagctattaatgtggatatagtcacagtgatgccaaagcatgaa
gatttaaaggaacctttagaatttcgccttgatcaagtaagcaaaactttcaaaattgga
gagcacgtcaaagttgttagaggtaaatttgaaggagatactggtcttgtggttcgggtt
aatgaagaagatgacggtttagttttgtttaccgacttgacaatgcacgaggtaaaggtg
ctcacgcgtgatgtacaattatgtacggaaattagcagcggtattgattcctctggtcat
tttcagcttggcgatttagttcaaattgattcacaaacagtgggttgcgttgtacgcgtt
ctacgagaagaaatggctgtattaaatatgcatggcaaagttgtcaaagttaagccgcaa
agtatttctaaaaagcgagactctcgtaatgcagttgcattggatggagacgggaatgca
cttcatattaaagatatcgtcaaagtcattgatggacctcataacggacagcaagctgaa
gtcaagcacctgtttcgaagttttgtatttttatactctaaaatgtttccagataatggt
ggcatttttgtttgcagaagtcgccacttaatacttgctggcagtgcaaagcgacaagat
aacggtgacagtagaacaccatttgtcccgcaatcacctcgaatcactagcccagctcat
cctcaagtgcaagtgagacatggaccaggtgcaggtagaggtcggggaaagaaaggacgc
gatcctataattggccagagtattcgcatattccaaggacctttcaagaattatatcgga
attgccaaagacgccacagatacaaccgtccgtgtagaattgcatagtacatgcaaaaca
atcactgttgatcgcagcagagtggtagtcgtaaaagacgggaaagaggaaagtgctggt
ggtgtaactggaataactcctagttatggaagtcaaactcctatgtatggatcaagaacc
cctatgtatggtgctcaaacgcctctttatgatggcaatcggactcctcgctatggttct
caaacacctatgcatgatggttcaagaacaccaagttattccagtgcgtgggatccgaaa
gtaccaaatactccatcaagcagaacagaggacgattttgattataacacagacagcgta
aatccatcgcctcaaggatatcatagtaatccagtaacgccaggttggataaaataa
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