Trichoplax adhaerens (placozoan): TRIADDRAFT_33552
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Entry
TRIADDRAFT_33552 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
tad
Trichoplax adhaerens (placozoan)
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tad03019
]
TRIADDRAFT_33552
03041 Spliceosome [BR:
tad03041
]
TRIADDRAFT_33552
03036 Chromosome and associated proteins [BR:
tad03036
]
TRIADDRAFT_33552
Enzymes [BR:
tad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TRIADDRAFT_33552
Messenger RNA biogenesis [BR:
tad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
TRIADDRAFT_33552
mRNA cycle factors
Common to processing body (P body) and stress granule
TRIADDRAFT_33552
Spliceosome [BR:
tad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
TRIADDRAFT_33552
Chromosome and associated proteins [BR:
tad03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
TRIADDRAFT_33552
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
PG_binding_2
Cystatin
Motif
Other DBs
NCBI-GeneID:
6759266
NCBI-ProteinID:
XP_002118053
JGI:
33552
UniProt:
B3SCV4
LinkDB
All DBs
AA seq
524 aa
AA seq
DB search
MVGGGGGGGRFNRNQGRFDDRGGNNNHFYGAGRGGGNRNNYGNGPGSGYGYRRDDRQGKS
SWTVPLPRNERIERNLFGNANTGINFSKYQDIPVEATGSNCPKHIEEFNQCDLGEIILGN
IELCQYNIPTPVQKYAISIITGKRDLMACAQTGSGKTAAFLIPILSLIFNGGPVVKPQSY
YGSRRKQFPLALILAPTRELAAQIYEEAKKFTYRAVARPCVVYGGADFGYQVKDLDRGCH
LLVATPGRLVDMLERGMIGLDYCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPSGQRQT
MMFSATFPKEIQVLARDFLDDYIFLAVGRVGSTSENIIQKMVWVEEDDKRAYLLELLNST
EPTSLSLVFVETKKGADSLQEFLVRMGYYSTAIHGDRSQRDREDALRAFRAGVRPILVAT
AVAARGLDIPNVAHVINFDLPSDIEEYVHRIGRTGRVGNVGTATSFFNEKNKNVAKDLVD
LLLEAKQSVPRWLDDVAVEMRYQSNNKRGGRRYSTNFCYCFHGS
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggttggtggtggcggcggcggtggccgatttaatcgcaatcaaggccgctttgatgac
cgaggtggcaataataatcatttttatggcgctggacgtggtggtggaaatcgcaataat
tatggcaatggccctggtagcggttatggatatcgtcgtgatgatagacaaggtaagagt
agttggacggttccattgcctagaaacgaaagaattgaaaggaatttatttggtaatgcc
aatactggaatcaactttagtaaataccaagatattccagtcgaagcaactggaagcaac
tgcccaaaacatattgaggagtttaaccagtgcgaccttggtgaaataattttgggtaat
atagagctttgccaatacaatatacctactccagtgcaaaaatacgctatctctattatt
actggaaaaagggatttgatggcttgtgcacaaacaggttctggtaagacagcagcgttt
ctaatacccatcctaagtttaatctttaatggtggaccagttgtaaaacctcaatcatat
tacggcagtagacgaaaacaattcccccttgctctaattctagcgcctacgagagaactt
gccgctcaaatttatgaggaagctaaaaagtttacttatcgagcggtagctagaccttgt
gtcgtttatggtggagccgactttggttatcaagttaaagacctcgataggggatgtcac
ctattagtagcaacacctggacgccttgttgatatgttagagagaggcatgataggtttg
gattactgcaaatatctggtcttagatgaagctgatcgtatgttggatatgggatttgaa
ccacaaattcgacgtatagttgagcaagatacaatgcctccatctggacagcgtcaaact
atgatgtttagtgccactttccctaaagaaatccaagtacttgccagagatttcttagat
gattacatttttctggctgttggacgtgtcggctctacgagtgaaaatattatccaaaaa
atggtatgggtagaagaagatgacaaaagagcttatctactggaattattaaattctacg
gaaccgacatcgctgtcgttggtttttgtcgagacgaaaaaaggtgccgactcattgcaa
gaatttttggtcagaatgggttattattcaacagctattcatggcgatcgttctcaacga
gatagagaagacgctcttcgagctttccgtgctggtgttaggccaattttagtagctacc
gctgttgctgctcgtggattagatatacccaacgttgcccatgttatcaactttgattta
ccaagtgatattgaagaatatgttcatcgaataggtcgaactggtcgtgttggtaatgtt
ggtacagccacgtcattctttaatgaaaagaacaagaatgttgccaaggacttagtagac
ttgctactagaagccaagcaatctgtgcctcgatggctggatgatgttgccgttgaaatg
agataccaaagcaataacaagcgtggcggtagaaggtacagtactaatttttgttactgc
tttcatggatcatga
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integrated database retrieval system
