KEGG   Trichoplax adhaerens (placozoan): TRIADDRAFT_34086
Entry
TRIADDRAFT_34086  CDS       T01069                                 
Name
(RefSeq) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
tad  Trichoplax adhaerens (placozoan)
Pathway
tad03030  DNA replication
tad03410  Base excision repair
tad03420  Nucleotide excision repair
tad03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TRIADDRAFT_34086
   03410 Base excision repair
    TRIADDRAFT_34086
   03420 Nucleotide excision repair
    TRIADDRAFT_34086
   03430 Mismatch repair
    TRIADDRAFT_34086
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tad03032]
    TRIADDRAFT_34086
   03400 DNA repair and recombination proteins [BR:tad03400]
    TRIADDRAFT_34086
Enzymes [BR:tad01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     TRIADDRAFT_34086
    6.5.1.6  DNA ligase (ATP or NAD+)
     TRIADDRAFT_34086
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     TRIADDRAFT_34086
DNA replication proteins [BR:tad03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    TRIADDRAFT_34086
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     TRIADDRAFT_34086
DNA repair and recombination proteins [BR:tad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     TRIADDRAFT_34086
   NER (nucleotide excision repair)
    Other NER factors
     TRIADDRAFT_34086
   MMR (mismatch excision repair)
    Other MMR factors
     TRIADDRAFT_34086
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme ATG29_N
Other DBs
NCBI-GeneID: 6759593
NCBI-ProteinID: XP_002118368
JGI: 34086
UniProt: B3SDP9
LinkDB
AA seq 707 aa
MNQKEDDAPVQTPYDDRLDIAHESCIVCALLHRFTVLLFDRQVDYEDIKPVDGPLYSPSK
ESYHPIRDACWALKQRVPYIAISRTFDEIEATSARLKIISTLRNFFRSVIILTPEDLTFC
VYMCLNKVGPAYEGLELGIGETILMKAIAQATGRSLASIKADVTERGDVGIVAETSRSNQ
RTMFTPAKLTVRSVFSKLKDIAKMTGTASMNRKSDKIKEMFVACRHSEARFLMRSLGGKL
RIGLAEQSVLVALAHATIYTPSNQVYPPHIIDASKGKAVDAFKKELDNGALLLKDAHCQC
PNYDLVIPALLKYGIHELSEHCKLSPGVPLKPMLAHPTKGIHEVLKRLEDKSFACEYKYD
GERAQIHLLDNGEVQIYSRNCENNTTKYPDIIMRMPEVKLDHINSFIIDTEAVAWDKEKQ
QILPFQILSTRKRKDVDANEIKVQVCVYAFDMLYCNGKSLVKETFEKRRSVLRSSFKEVE
GEFVFAKSRISADTEEIGEFLDESIKGNCEGLMVKTLQIEATYEIAKRSHSWLKLKKDYL
EGVGDTLDLVVIGGYLGKGKRTGTYGGFLLACYNDEDEEFQSICKIGTGFKDVELEQHTN
FLKQQTIEKPKSYYRYDSSVQPDHWFEAVQVWEVKVADLSISPVHKAAAGIVDPEKGISL
RFPRFLRIRDDKKPEEATTASQVAVLYRSQQNIVSASAGNEDFEDYY
NT seq 2124 nt   +upstreamnt  +downstreamnt
atgaaccagaaagaagacgatgcgccagtgcaaacaccgtacgatgatagacttgatatt
gcgcatgaatcttgcatcgtttgtgcattattacatcgttttacggttttactctttgat
aggcaagtagactatgaagatatcaagcccgttgatggacctttgtattctccatctaag
gaatcttaccatcctatacgagatgcttgctgggccttaaagcaaagagtcccatacatt
gctatatctcgaacattcgatgaaatcgaagctacttcagcacgattaaaaattatttca
acgctgcgaaattttttccgatctgtaatcattttaacgccagaagatttaacgttctgt
gtttatatgtgcctgaataaggttggtccagcttatgagggattagaattaggtatcggc
gaaacaatactaatgaaagcgattgcacaagcaacaggccgaagcttagcctcaattaag
gcagatgttacagaacgtggtgacgttgggattgtagcggagactagtcgtagcaatcaa
cgaacaatgtttactccagctaaacttacagtgcgcagcgtattttcaaagcttaaagac
attgcaaaaatgactggaacagcatcaatgaacagaaagtcggataaaatcaaggagatg
tttgtagcttgcagacactcggaagcgagatttctaatgagatctttaggtggaaaatta
agaattggcctagctgagcaatcagttctagttgcattggcacatgccactatctataca
ccatcaaatcaagtatatccaccgcatataatagatgctagcaaaggtaaggcagttgat
gctttcaagaaagaattagacaatggggctttgttactaaaggatgcacactgccagtgt
ccaaattacgatcttgtcataccggcccttttaaaatatggtattcacgaattatcggaa
cattgcaaattgtccccaggtgttcctttgaagcctatgcttgctcatccaactaaagga
atacatgaagtattgaaacgcctagaagataaaagttttgcttgtgaatataaatatgat
ggggaaagggctcagattcatttattagataatggagaagtgcaaatttatagtcgcaat
tgtgagaacaataccacaaagtatccagatataatcatgcgtatgccagaggtaaaattg
gatcacatcaactccttcattattgatacggaagctgtcgcttgggataaagaaaaacag
cagattttaccttttcagatcttaagcaccaggaaacgtaaggacgttgatgctaatgaa
atcaaagtccaagtttgtgtttatgcatttgatatgttgtactgcaatggcaagtctttg
gttaaagaaactttcgagaaacgaagatcggtgttgaggtcatcctttaaagaagtagag
ggggaatttgtgtttgcaaagtcaaggatctctgcagacacagaagaaattggcgaattt
cttgatgaatctattaaaggtaattgtgaaggactgatggttaaaactttacaaatcgaa
gctacttatgaaattgccaaacgatctcatagctggttgaagctgaaaaaggactatttg
gaaggtgttggtgatactttggatctagtcgtcattggaggttatcttggtaaggggaag
agaacaggaacatatggtggttttttgttggcatgttataacgatgaagacgaagagttt
cagtcaatatgtaagattggaacaggatttaaagatgttgaattagaacagcacacaaac
tttctcaagcagcaaactattgaaaaaccgaaatcttactatcgctatgatagtagtgtc
caaccggatcattggtttgaagctgtacaagtatgggaagttaaagtagctgatctatcg
atatcaccagttcataaggctgccgctggaatagttgatccagagaagggaatatctttg
cgatttcctcgatttctacgtattcgtgatgacaaaaaaccggaagaagctacaacagct
tctcaggttgcggttttgtatagaagtcaacaaaatatagttagtgcttcggctggtaat
gaagatttcgaagattattactga

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