KEGG   Trichoplax adhaerens (placozoan): TRIADDRAFT_49741
Entry
TRIADDRAFT_49741  CDS       T01069                                 
Name
(RefSeq) hypothetical protein
  KO
K14962  COMPASS component SWD2
Organism
tad  Trichoplax adhaerens (placozoan)
Pathway
tad03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tad00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    TRIADDRAFT_49741
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tad03019]
    TRIADDRAFT_49741
   03036 Chromosome and associated proteins [BR:tad03036]
    TRIADDRAFT_49741
Messenger RNA biogenesis [BR:tad03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     TRIADDRAFT_49741
Chromosome and associated proteins [BR:tad03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     TRIADDRAFT_49741
    COMPASS/SET1 complex (yeast)
     TRIADDRAFT_49741
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_1st WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 Beta-prop_WDR3_2nd EIF3I Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_VPS8 Beta-prop_TEP1_C DSE1_N Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_SPT8 PAC11 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_NOL10_N CFAP251_N Beta-prop_WDR19_1st Beta-prop_WDR41 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_Vps41 Tricorn_2nd Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Beta-prop_HPS5 MinC_C Beta-prop_DCAF4 WD_LRWD1 MIOS_WD40
Other DBs
NCBI-GeneID: 6750121
NCBI-ProteinID: XP_002108174
JGI: 49741
UniProt: B3RI79
LinkDB
AA seq 318 aa
MKKMLLNEDTIRSLRVAKIFRENNDKINAADFSKNGELLICSSQDDSIVIYDCLKGTTKR
TIYSKKYGVDHIQFTHAPNTVIHSSSKVDDTIRYLSLHDNKYLRYFNGHTKRVVSLNMSP
TEDKFISTSLDHTVRLWDLRSPNCQGLMHANGRAIASFDPDGLIFAVGINSQQVKLYDVR
SFDKGPFSTFQLSEEHLRDWTGLKFSGDGKMILIYSNGNFIQLLDSFNGDELRNFSVHIF
YIAVSLEASFTPDSQFILSGSADGQVHIWNTDTGDKVAVLQGHHPSAVQCIKFNPKYMMM
ISACTNTAIWITESNEEG
NT seq 957 nt   +upstreamnt  +downstreamnt
atgaaaaagatgttattaaacgaagataccattcgttcactccgagtagctaaaattttc
cgagaaaataatgataaaataaatgcagctgatttttcgaagaatggagagttacttata
tgtagcagtcaagatgattctattgtaatttatgattgtttgaagggaacaactaaaaga
actatctatagcaaaaagtatggtgtggatcatatacagttcactcacgcgccgaatacc
gtaatccactcctcatcaaaggttgatgatactattcgatatttgtcattgcatgacaat
aaatatttacgctattttaatggtcacacaaagagagttgtatcacttaatatgtcacct
acagaagataaattcatttcgacgtcgctagatcatactgtacgactatgggatttaaga
tcgcctaattgtcaagggctaatgcatgctaatggaagagccatagcgtcttttgatcca
gatggactaatattcgccgtaggtatcaattctcagcaagtaaagctatacgatgtccga
tcatttgataagggaccattttctacatttcaactgtcagaggaacatcttcgtgattgg
accgggctaaagttcagtggcgacggcaaaatgatcttaatttatagtaacggaaatttt
attcaactactcgattctttcaatggagacgagctacgaaattttagtgtacatattttt
tatatagctgtttccttagaagcttcttttaccccggattcacaatttatcttatcaggc
tcagctgatggtcaagttcatatatggaatacagatactggcgataaagttgctgtttta
cagggacatcatcctagtgctgtacagtgcattaagtttaatccgaagtatatgatgatg
ataagcgcatgtactaatacggctatttggataacggagagcaatgaagaagggtag

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