Trichoplax adhaerens (placozoan): TRIADDRAFT_49741
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Entry
TRIADDRAFT_49741 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K14962
COMPASS component SWD2
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TRIADDRAFT_49741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tad03019
]
TRIADDRAFT_49741
03036 Chromosome and associated proteins [BR:
tad03036
]
TRIADDRAFT_49741
Messenger RNA biogenesis [BR:
tad03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
TRIADDRAFT_49741
Chromosome and associated proteins [BR:
tad03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
TRIADDRAFT_49741
COMPASS/SET1 complex (yeast)
TRIADDRAFT_49741
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
Beta-prop_TEP1_C
DSE1_N
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_SPT8
PAC11
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_NOL10_N
CFAP251_N
Beta-prop_WDR19_1st
Beta-prop_WDR41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_Vps41
Tricorn_2nd
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
Beta-prop_IFT140_1st
Beta-prop_HPS5
MinC_C
Beta-prop_DCAF4
WD_LRWD1
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
6750121
NCBI-ProteinID:
XP_002108174
JGI:
49741
UniProt:
B3RI79
LinkDB
All DBs
AA seq
318 aa
AA seq
DB search
MKKMLLNEDTIRSLRVAKIFRENNDKINAADFSKNGELLICSSQDDSIVIYDCLKGTTKR
TIYSKKYGVDHIQFTHAPNTVIHSSSKVDDTIRYLSLHDNKYLRYFNGHTKRVVSLNMSP
TEDKFISTSLDHTVRLWDLRSPNCQGLMHANGRAIASFDPDGLIFAVGINSQQVKLYDVR
SFDKGPFSTFQLSEEHLRDWTGLKFSGDGKMILIYSNGNFIQLLDSFNGDELRNFSVHIF
YIAVSLEASFTPDSQFILSGSADGQVHIWNTDTGDKVAVLQGHHPSAVQCIKFNPKYMMM
ISACTNTAIWITESNEEG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatgttattaaacgaagataccattcgttcactccgagtagctaaaattttc
cgagaaaataatgataaaataaatgcagctgatttttcgaagaatggagagttacttata
tgtagcagtcaagatgattctattgtaatttatgattgtttgaagggaacaactaaaaga
actatctatagcaaaaagtatggtgtggatcatatacagttcactcacgcgccgaatacc
gtaatccactcctcatcaaaggttgatgatactattcgatatttgtcattgcatgacaat
aaatatttacgctattttaatggtcacacaaagagagttgtatcacttaatatgtcacct
acagaagataaattcatttcgacgtcgctagatcatactgtacgactatgggatttaaga
tcgcctaattgtcaagggctaatgcatgctaatggaagagccatagcgtcttttgatcca
gatggactaatattcgccgtaggtatcaattctcagcaagtaaagctatacgatgtccga
tcatttgataagggaccattttctacatttcaactgtcagaggaacatcttcgtgattgg
accgggctaaagttcagtggcgacggcaaaatgatcttaatttatagtaacggaaatttt
attcaactactcgattctttcaatggagacgagctacgaaattttagtgtacatattttt
tatatagctgtttccttagaagcttcttttaccccggattcacaatttatcttatcaggc
tcagctgatggtcaagttcatatatggaatacagatactggcgataaagttgctgtttta
cagggacatcatcctagtgctgtacagtgcattaagtttaatccgaagtatatgatgatg
ataagcgcatgtactaatacggctatttggataacggagagcaatgaagaagggtag
DBGET
integrated database retrieval system