Trichoplax adhaerens (placozoan): TRIADDRAFT_49781
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Entry
TRIADDRAFT_49781 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K14309
nuclear pore complex protein Nup93
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TRIADDRAFT_49781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tad03019
]
TRIADDRAFT_49781
Messenger RNA biogenesis [BR:
tad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TRIADDRAFT_49781
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
Vps39_1
MIT
HTH_Mok13
Mre11_C_bact
Motif
Other DBs
NCBI-GeneID:
6749458
NCBI-ProteinID:
XP_002108984
JGI:
49781
UniProt:
B3RJ10
LinkDB
All DBs
AA seq
828 aa
AA seq
DB search
MASNTNAVTFDELVQHAEQLNADIEHGLELPRVERSLLQISETVQKLKSKTIHATGEMKD
VKAKASMLLGSNGVDLTDLDQDVDILATSANLHPLEPISDSDIQGFIRNERENAMLSAIE
EARRNTMEMAEQHQWQYMVTEWEKEKVKILNHLIGSGEDIAVTDDNDGPSSVAIIEKQGV
MDAIELSYAREIYIRNERLINGEQVNLIQALREAASREADANIVDIWDLIYEIADIEITE
VIDPLALRYEAESQMLFINKARNCLERRYLDYVKKTIYGNLHQAKLGGVPSTYHTVKSFL
NITMPNSVLNLEDGLVDDKPVWAMIYYCIRCGDLKAMLNAADLQYLGEITNYLEEFANSP
NHSISAPSATKVQLMYKRSEGHSSDPFKRFELFTVLWEVVTRLIVTLKLQLKQKIIFGLR
HGITISNTPNEDNSQSQEVFTLPQLQTLLIDHYGESHFNAYQQPLLYFRVLLLTMQFEAA
IEFLFRIARYRTHSIHFAISLYEAHILSLSKSSQSQLLEPSDPQPSRRLNFCRLIMSYIR
KFEGTNTREALQYLYLLKGIKNPQGEDVFESSLSELALETREFDMLLGSLNSDGSKKLGC
IDKFYISGAKAVIEKVAVESEKKGLFEEAIKLYDLAKNHEKVLEILNRLLSQVVPKSNDS
DNTRSRLQDLAVSIAQRFKSLGHFASRVRLKALYILLDVMLFFDLFHGHNYEQALDVVKK
IGILPLEIDDTVEQKVASFKQIADEIKRNIPQVLLATMNILYAQYESIRPGSIQNPLLTS
RANDGGRDMHVKEIRRQARTLITFAGMISYRIPGDTNSRLVQIELLMN
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaatacaaatgcggttacgttcgacgaacttgttcagcatgccgaacagctg
aatgctgatatagaacatggtttagaattgcctcgggtggaacgaagtttattacaaatc
tcagaaacggtacagaaattgaagagtaaaactattcatgctaccggtgaaatgaaagat
gtaaaagcaaaagcgtctatgctattaggatctaatggtgtcgatttgactgatcttgac
caagacgttgatattttggcaacatccgctaacttgcatcctctggaaccgattagtgat
tcggatattcagggcttcataaggaacgaacgtgaaaatgctatgttatctgctatagaa
gaagctagacgaaatacaatggaaatggcagagcaacatcaatggcaatatatggtcaca
gaatgggaaaaagagaaagtaaaaattttaaatcatctaatcggtagcggagaagatatt
gctgtaactgacgacaatgatggccctagtagcgttgcaattattgaaaaacaaggtgtg
atggatgcgatagagctttcttatgcacgggagatatacattcgcaatgaaaggctcatt
aatggagagcaagttaatcttattcaggcattacgagaagctgcttctagggaggctgac
gcgaacattgtagatatttgggatctaatttatgaaatagccgatatcgaaatcactgag
gttatcgatccgctagcactacggtatgaagcagaatcacaaatgttgtttataaataag
gcacgaaattgtttggaaaggagatatttagattacgttaaaaagacaatttatggaaac
ttacatcaagcaaagttaggtggtgtcccgagtacttatcataccgtaaaaagttttctg
aatatcactatgcctaattctgtcttgaatttagaggacggtctagttgatgataagcca
gtgtgggctatgatttactattgtattcgatgcggagacttaaaagcgatgttgaacgct
gctgacctacaatatctaggcgagattacaaattatcttgaagaatttgctaatagccct
aatcacagtatttctgcgccatctgcaactaaggtgcaactcatgtacaaaagatctgaa
gggcatagctctgaccccttcaaacgcttcgaattgtttactgtattgtgggaagttgtg
acccgactgatagtcacgctgaagttgcaactaaaacagaagattatatttggcttaagg
catggaattactatatctaatacaccaaacgaagacaacagtcaatctcaggaggttttt
acacttcctcaactgcaaacgttactgatagatcattatggagaatctcactttaatgca
tatcaacaaccgttactgtacttcagagtgcttcttcttacaatgcagtttgaagcggct
atcgagtttttatttaggatcgctagatatcgaactcatagtatccattttgccatctca
ttatatgaagcccatatactctctttgtctaagtcatcccaatcacaattactagaacct
tcggatcctcagccttctcgacgtttgaatttttgtcgtttaataatgtcctacataaga
aaattcgaaggcacaaatacaagagaagcgctacaatatctatatttattgaaaggaata
aaaaaccctcaaggtgaagatgtttttgagtcttcgttaagcgaattggctttggaaacc
agagaatttgatatgcttctaggcagcttaaacagcgatggaagtaaaaaacttggctgt
atagataaattttacataagtggtgcaaaggcggttattgaaaaagttgccgttgagtcg
gaaaagaaaggactatttgaagaagctattaagttatatgacttagcaaagaatcatgaa
aaagttttggaaattcttaacagacttcttagtcaggtcgtaccgaaatcgaatgacagt
gataacacaagatctcggttacaggatttggctgtttctatcgctcaacgcttcaaatcg
cttggccatttcgcaagtcgagtacgtcttaaagcactatatatacttttggatgtgatg
ctgttcttcgacttatttcacggtcataattacgaacaggcccttgatgttgttaagaaa
attggtatactacctttagagattgatgatactgtggaacaaaaagttgcttcctttaaa
caaattgctgatgagataaaacgaaatattcctcaagtattgttagcaacgatgaatatc
ctgtacgctcagtatgaatctatcagacctggaagtatacaaaatcccttgctgacatct
cgagcaaatgatgggggcagagatatgcatgttaaagaaatacgtcgtcaggcccgtaca
ttaatcacttttgccggaatgatatcctatcgtattccaggagataccaactcacgtctt
gtacaaatagaactcctcatgaattaa
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