Trichoplax adhaerens (placozoan): TRIADDRAFT_49897
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Entry
TRIADDRAFT_49897 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K08524
retinoid X receptor alpha
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
TRIADDRAFT_49897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tad03000
]
TRIADDRAFT_49897
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tad03310
]
TRIADDRAFT_49897
Transcription factors [BR:
tad03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
TRIADDRAFT_49897
Nuclear receptors [BR:
tad03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
TRIADDRAFT_49897
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
6751230
NCBI-ProteinID:
XP_002109459
JGI:
49897
UniProt:
B3RPF4
LinkDB
All DBs
AA seq
327 aa
AA seq
DB search
MSICGQRSLRRHYGVYSCEGCKGFFKRTVRKNLTYTCRDNRNCDIDKKQRNRCQYCRYQK
CLQVGMKQEAVQEERVKNSTPTSKTTLPIAIADGFPLPTYGNDEMPVEAIRDAESTLNMN
SVPYVEMQSNPVLNICQAADKQLFNLVEWAKKIPHFCDLCVDDQVILLRSGWNELLIAAF
SFRSIAVEDGLLLSTGHYIHRTSAHNAGIGAIFDRILTELVNQMRYLKMDKTELGCLRAI
ILFNPDVRGLTSADRVEKYRELVYGALEAYVKKRFPDQLCRFAKLLLRLPALRAISLKTL
EHLFFYKLIGDPPIDTFLMEMLETGSS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatttgcggtcaaagatcgctaaggaggcattatggcgtttacagttgtgaaggt
tgcaagggtttcttcaagcgtacagtgcgcaaaaatttaacttacacatgccgtgataat
cgaaactgtgatattgataaaaagcaacgaaatcgatgtcagtattgtcgataccagaag
tgtctgcaagttggtatgaagcaagaagccgtgcaggaagagcgcgtaaagaatagcaca
ccaactagtaaaaccaccttaccgatagcaatagcggatggcttcccattaccgacatat
gggaacgatgaaatgccagttgaagctatccgagatgctgaatctacgcttaatatgaat
agtgtaccttacgtcgaaatgcaaagtaaccctgtcttaaatatttgtcaagctgcagat
aaacaactatttaatttggttgaatgggccaagaaaataccccatttctgtgatttatgt
gtcgatgaccaagtaatacttctgagatctggttggaatgaattactgatagctgcgttt
tcgtttcgatcaatagctgttgaagatggcttgctcttatcgactgggcattatattcat
cgcactagcgcgcataatgctggtattggggctatatttgataggattttaacagagttg
gttaatcaaatgagatatttaaaaatggataaaactgaattgggctgtttgagagctatt
atattgtttaatccagatgttcgcggtttgacatcagctgatagggttgaaaagtatcga
gagctggtatatggagctctagaggcttacgtcaagaaaaggtttcctgaccagctctgt
cgctttgctaaactactgcttcgattgccggccttaagagcgataagtttaaagaccttg
gagcatcttttcttttataaattaattggtgatccaccaattgacacattcttaatggaa
atgctggaaacaggcagttcttaa
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