Trichoplax adhaerens (placozoan): TRIADDRAFT_50379
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Entry
TRIADDRAFT_50379 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03022
Basal transcription factors
tad03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TRIADDRAFT_50379
09124 Replication and repair
03420 Nucleotide excision repair
TRIADDRAFT_50379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tad03021
]
TRIADDRAFT_50379
03400 DNA repair and recombination proteins [BR:
tad03400
]
TRIADDRAFT_50379
Enzymes [BR:
tad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
TRIADDRAFT_50379
Transcription machinery [BR:
tad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TRIADDRAFT_50379
DNA repair and recombination proteins [BR:
tad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TRIADDRAFT_50379
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
HBB
ResIII
Motif
Other DBs
NCBI-GeneID:
6754469
NCBI-ProteinID:
XP_002113256
JGI:
50379
UniProt:
B3RYU5
LinkDB
All DBs
AA seq
720 aa
AA seq
DB search
MKLNIDGLLVYFPYDYIYPEQYSYMCELKRALDAKGHCALEMPSGTGKTISLLSLIIAYQ
KVYPLHITKLIYCSRTVPEIEKALEEMKILLEYYEKQTGEKQKFLGLGLSARKNLCIHPE
ISKERDGKVVDGRCLGLTASYVRRNHQQDRSVEVCSFFEKFDTFGRDSVLPPGVYNLDDL
KDFGAKQGWCPYFLARHSILHANVVVYSYYYLLDPKIADLVSKEMSKQSVVVFDEAHNID
NVCIESMTVKISRKTIDRCQTALDVMDKKVKKIKETDKKKLQEEYRRLVEGIYLIPDKTI
ALLIVQHVVQETPMSFLHHIKETVCIDRKPLRFCSERLQSLMHTLEIINNSEFAALAAAA
SFATLVSTYSKGFTLIIEPFDDRAPTIPDPVLHFSCMDASIAIKPVFDRFQSVVITSGTL
SPLDMYPKILNFRPVSMSSYTMTLARPSLCPLIVTRGNDQVTISSKFESREDIAVMRNYG
NLLAELTASVPDGVVCFFPSYTYMESVVSFWCDQGIMNNIIRNKLLFIETQDLAETVLAL
ENYYKACENGRGAVLLSVARGKVSEGIDFDHHYGRAVLMFGIPYVYTQSRKLRARLDYLR
ENYQIRENDFLTFDAMRHAAQASCVGRAIRGKSDYGIMVFADKRYSRLDKKGKLPKWIQE
YLKDSVCDLTTDEAVQISKKFLRQMAAPFNKEDQLGLSLLTLEQLESREGQEAAKLAQRS
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgaatattgatggcttattggtctattttccctatgattatatctatcctgaa
caatactcatatatgtgtgagctcaagcgagctcttgatgcaaagggccactgcgctttg
gagatgccttcagggactggtaaaactatatccctattatctttaattatagcatatcaa
aaggtttatccgttgcatatcaccaaattaatatattgttcacgtacagtaccagaaatt
gagaaggcgttggaagaaatgaaaattcttctcgaatactacgagaaacaaaccggagaa
aaacagaaatttcttggactaggtcttagtgctcgtaagaatctttgtatacacccagag
atcagcaaagaacgtgatggtaaggttgttgatggcagatgtcttggtttaactgcatct
tatgtacgtagaaaccatcaacaagatcgatcagtagaagtttgcagcttttttgagaaa
tttgatacatttggtcgagactctgttttacctcctggagtctataacctggatgactta
aaagactttggtgcaaaacaaggatggtgtccttattttcttgctcggcattcaatcttg
cacgcaaatgtggtggtgtatagctattattacttgctagatccgaaaattgccgattta
gtatctaaggaaatgtctaaacaatctgtagtggtcttcgatgaagctcacaacattgat
aacgtttgcattgaatctatgactgtaaagatatctagaaaaaccattgatagatgccaa
accgccttagacgttatggataagaaagttaaaaagattaaggaaaccgataaaaagaaa
cttcaagaagaataccgaagattagttgaaggtatttacttaataccggataaaaccatt
gctttgttaatagttcagcatgttgtgcaagagactccaatgtcgtttcttcatcacatt
aaggagacagtatgtattgataggaagcctttaagattttgttcagaaagattacaatca
cttatgcatactttggaaataataaacaatagcgaatttgctgctctagcagctgcagca
agctttgctacgcttgttagtacctattctaaaggattcactctcatcattgagccattt
gatgatcgtgcacccacaataccagatccagttctacattttagttgcatggatgcatct
atagctataaagccggtatttgatcgttttcaatccgtagttataacctcagggacttta
tcacctttagacatgtatccgaaaattctaaattttcgccctgtatctatgtcatcatat
acgatgacattggcgcgtccaagtttatgcccattaattgttactagaggaaatgatcaa
gttacaataagttccaaattcgaatcacgcgaagatattgctgtcatgagaaactatggt
aatctactagcagagctgaccgcttctgtaccagatggagttgtttgtttcttcccgagt
tatacctatatggaatcagtcgtaagcttttggtgtgaccagggtattatgaataatatt
attagaaacaagctcttatttattgagacacaagatctggctgagactgtcttggcttta
gaaaattattataaggcgtgtgaaaatggtcgaggtgcagtattattatctgtagcacgt
ggcaaagtttcggaaggaattgactttgatcatcattacggccgagccgtactcatgttt
ggtatcccatatgtgtatacacaaagtcgtaaattacgggccagattagattatcttcgg
gaaaattatcaaattcgagaaaatgatttcttgaccttcgatgcaatgagacacgcagca
caggcaagttgtgttggtcgagcaatccgaggaaaatcagattatggtataatggtattt
gcagataagcgctattcaagactagataaaaagggaaaacttccaaagtggattcaagaa
tatttaaaggattctgtttgtgatttaacaacagatgaagctgtacagatttctaaaaaa
tttttaagacaaatggctgctcctttcaataaggaagatcaacttgggctatcgctttta
acccttgaacagttagaatctagagaaggccaagaagctgcaaaacttgctcaaagaagc
tga
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