Trichoplax adhaerens (placozoan): TRIADDRAFT_50410
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Entry
TRIADDRAFT_50410 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03013
Nucleocytoplasmic transport
tad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TRIADDRAFT_50410
03015 mRNA surveillance pathway
TRIADDRAFT_50410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tad03019
]
TRIADDRAFT_50410
Enzymes [BR:
tad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TRIADDRAFT_50410
Messenger RNA biogenesis [BR:
tad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
TRIADDRAFT_50410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
C2H2-2nd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
6754608
NCBI-ProteinID:
XP_002113395
JGI:
50410
UniProt:
B3RZN1
LinkDB
All DBs
AA seq
404 aa
AA seq
DB search
MSLLNKVLRSKLVSTTADIEVQRQDPNSPLYSVKSFEELNLAEAVLKGVYGMGFNTPSKI
QETALPLLLGAKPSNMIAQSQSGTGKTAAFALCLSPTLELAQQTGKVCKQMSKFLDIKIA
MATRGEEHGRRREKKVEQIIIGTPGTILDWIRLKLFDPSKLGIFVLDEADVMIDTQGHRD
QSIKVHRHLKKSAQFLLFSATYEDRVMKFAESIVPNPVIIRLKRSEESLSNIKQFYIRCQ
DRQEKFEALSNIYGTISIGQAMVFCHTKKSAQWLAMKMKEDGHAVALLTGDNSPEERMFV
IDRYRSGKEKLLVTTNVCARGIDVEQVSVVINYDVPLDGRGIPDCETYLHRIGRTGRFGK
KGIAINFVDSDRSFNNLKSIEKHFGRKINQIIADDPDQLEQLAD
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttttaaataaagttttacgctccaagctcgttagcactactgctgacattgaa
gttcagcgtcaagatccaaattctccgttatattccgtaaaatcttttgaggaattaaat
ttggcagaagctgttctgaagggtgtatacggcatgggcttcaacactccatccaaaatt
caagaaaccgctttgccactccttttaggagccaagccgtcgaatatgattgcacaatca
cagtcgggaacaggaaagactgccgcatttgccctttgcttgtcaccaacgttagaatta
gcacagcaaacgggtaaagtttgtaaacaaatgagtaaattcttagatattaaaatagca
atggcgaccagaggagaagagcatggtagacgaagggaaaagaaggtagagcaaatcatt
attggtactccgggtacaattttggactggattagactgaaattatttgatcctagcaag
ttgggtatatttgttttggacgaagcggatgtaatgattgatacacaaggccaccgtgat
caatcaatcaaggtgcacaggcacttgaagaaaagtgctcaatttctcttgttctccgcg
acgtacgaagatcgtgtcatgaaatttgcagaatccatcgttccaaatcccgttattatc
agattaaaacgtagtgaagaaagcttaagcaacattaaacaattttatattcggtgtcaa
gaccgacaagaaaaattcgaagcactatctaatatctatggaactattagcatcggccaa
gccatggtcttttgtcatactaaaaaatctgcgcaatggttagctatgaagatgaaagaa
gatggtcacgctgtggctttgttaacgggagacaattctcctgaagagcgtatgtttgtc
attgataggtacagaagtggaaaagaaaaacttttagtaacaactaacgtatgtgctcgt
ggtattgatgtggagcaagtgtctgttgtcatcaattacgatgtgcctcttgatggccgt
ggaatccctgattgcgagacttatttacatcgtattggtagaactggtcgttttggaaag
aaaggtattgctattaatttcgtggattctgaccgatctttcaataatttaaagtcgata
gagaaacattttggtcgaaagattaatcagattatagcagacgaccctgaccagttggaa
caattagctgattga
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