Trichoplax adhaerens (placozoan): TRIADDRAFT_50612
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Entry
TRIADDRAFT_50612 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRIADDRAFT_50612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tad03019
]
TRIADDRAFT_50612
Messenger RNA biogenesis [BR:
tad03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
TRIADDRAFT_50612
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
TRIADDRAFT_50612
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
6755848
NCBI-ProteinID:
XP_002114810
JGI:
50612
UniProt:
B3S3C6
LinkDB
All DBs
AA seq
194 aa
AA seq
DB search
MAAEVGNPVIPGQRLGSIDQFSAGLGTYVRQRHIYASLVGYKDIISQAGQLPKIQIKTGN
VSCNLPTIGKVVTAKVLNVNPRFCRVLIICIGTTPLKEPFKGTIRKEDIRATEKDKVDMY
NCFKPGDAVLAEVISLGDPRSYYLSTAKNELGVIFAKSTAGHPMVPISWTEMQCPHTEKI
ELRKVAGIKYWTDS
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgaagtaggtaaccctgttatacctggacaacgccttggcagtattgatcaa
ttctcagctggacttggaacctatgttaggcaaaggcatatctatgcaagcttagtaggt
tacaaagatattattagccaagctgggcagctacccaagattcagatcaagaccggcaat
gtctcctgtaatttacccacgattggaaaagttgttacagctaaggtattaaacgtcaat
ccaagattttgtagagtgctcattatctgcattggaacgacgccattaaaggaacccttc
aaaggcacgataaggaaagaagatattagagccactgagaaagataaagttgatatgtac
aattgctttaaacctggagacgcagtcttagctgaagtcatatcactaggtgatccaaga
tcttattacttatcgacagcaaaaaatgagttaggagtcattttcgctaagagtacagcc
ggtcacccgatggttccaatcagttggacggagatgcaatgtcctcatacggaaaaaata
gaattacgaaaagttgctgggataaaatattggactgatagctga
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