KEGG   Trichoplax adhaerens (placozoan): TRIADDRAFT_50612
Entry
TRIADDRAFT_50612  CDS       T01069                                 
Name
(RefSeq) hypothetical protein
  KO
K07573  exosome complex component CSL4
Organism
tad  Trichoplax adhaerens (placozoan)
Pathway
tad03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TRIADDRAFT_50612
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tad03019]
    TRIADDRAFT_50612
Messenger RNA biogenesis [BR:tad03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     TRIADDRAFT_50612
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     TRIADDRAFT_50612
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1
Other DBs
NCBI-GeneID: 6755848
NCBI-ProteinID: XP_002114810
JGI: 50612
UniProt: B3S3C6
LinkDB
AA seq 194 aa
MAAEVGNPVIPGQRLGSIDQFSAGLGTYVRQRHIYASLVGYKDIISQAGQLPKIQIKTGN
VSCNLPTIGKVVTAKVLNVNPRFCRVLIICIGTTPLKEPFKGTIRKEDIRATEKDKVDMY
NCFKPGDAVLAEVISLGDPRSYYLSTAKNELGVIFAKSTAGHPMVPISWTEMQCPHTEKI
ELRKVAGIKYWTDS
NT seq 585 nt   +upstreamnt  +downstreamnt
atggctgctgaagtaggtaaccctgttatacctggacaacgccttggcagtattgatcaa
ttctcagctggacttggaacctatgttaggcaaaggcatatctatgcaagcttagtaggt
tacaaagatattattagccaagctgggcagctacccaagattcagatcaagaccggcaat
gtctcctgtaatttacccacgattggaaaagttgttacagctaaggtattaaacgtcaat
ccaagattttgtagagtgctcattatctgcattggaacgacgccattaaaggaacccttc
aaaggcacgataaggaaagaagatattagagccactgagaaagataaagttgatatgtac
aattgctttaaacctggagacgcagtcttagctgaagtcatatcactaggtgatccaaga
tcttattacttatcgacagcaaaaaatgagttaggagtcattttcgctaagagtacagcc
ggtcacccgatggttccaatcagttggacggagatgcaatgtcctcatacggaaaaaata
gaattacgaaaagttgctgggataaaatattggactgatagctga

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