Trichoplax adhaerens (placozoan): TRIADDRAFT_50671
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Entry
TRIADDRAFT_50671 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03030
DNA replication
tad03420
Nucleotide excision repair
tad03430
Mismatch repair
tad03440
Homologous recombination
tad03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TRIADDRAFT_50671
03420 Nucleotide excision repair
TRIADDRAFT_50671
03430 Mismatch repair
TRIADDRAFT_50671
03440 Homologous recombination
TRIADDRAFT_50671
03460 Fanconi anemia pathway
TRIADDRAFT_50671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tad03000
]
TRIADDRAFT_50671
03032 DNA replication proteins [BR:
tad03032
]
TRIADDRAFT_50671
03400 DNA repair and recombination proteins [BR:
tad03400
]
TRIADDRAFT_50671
Transcription factors [BR:
tad03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
TRIADDRAFT_50671
DNA replication proteins [BR:
tad03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
TRIADDRAFT_50671
DNA repair and recombination proteins [BR:
tad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
TRIADDRAFT_50671
MMR (mismatch excision repair)
TRIADDRAFT_50671
DSBR (double strand breaks repair)
HR (homologous recombination)
TRIADDRAFT_50671
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
POT1
IBR
GDH2_N
Motif
Other DBs
NCBI-GeneID:
6756582
NCBI-ProteinID:
XP_002115239
JGI:
50671
UniProt:
B3S571
LinkDB
All DBs
AA seq
556 aa
AA seq
DB search
MMIFLQIRLFATVKTHQHRFFKWLIVLSDGIHAYSSVMLATQLNQRVTSGELDAKAIIKL
NNYTCNIVQETRKVLVILDLTVLTCGSETDIIGQPKPYNDQSVTNPRPTIHPQQNLVDKS
ENRIVFPISSLTPYQNRWTIRTRVTSKSEIRKWSNSRGEGKLFSVDLIDESGEIRATAFR
DQVEKFYDVLEVNKVYYISRCSIKTANKNFTSIKNDYEMTFTNETAVEPCDDIASLPKVS
FNFVRIGDIENQPAERMIDVVGVVKSADDVVTINTKSNRQVNKRDIELVDDSGKVVRLTL
WGTNAEEFDGSQFPVVAVRGARVTEFGGRSLSVVGSSQLMTNPDIPEAHILRGWFDVQGK
DQELVSISTKRGDIGSPGFSGNWKNISDIHGENLGQQEKADYFNLKATIIYIRKENLMYK
ACPKEDCNKKVIDQGGSYRCEKCNQTFPDFKYRLMISASIVDSTGSNWLTFFQETGEAML
KCTAQQLGAWKENDESKYEHTINEALFQSYILKVRAKMESFNDENRLKCSCVNLTPMDYV
QQSRRLLEGIRRMQMV
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcttcttacaaattaggctatttgcaacggtgaaaacccaccaacaccgattt
ttcaagtggctaattgttctctccgatggcatccatgcttattcatccgtcatgttggca
actcaactaaatcaaagagttactagtggtgaattggatgctaaagctattattaagctc
aataactacacttgtaatattgtacaagaaacaaggaaagtactggtaatcttagattta
acagttcttacttgtggaagtgaaacggatataattggtcagcccaaaccgtataatgac
caatctgtgacaaatccccgtcccaccatccatccccaacagaatttggttgacaaatcc
gaaaatcgcattgtttttccaatcagtagcctcactccttatcaaaacagatggacgatt
cgaactcgtgtaacgagtaaaagtgaaattagaaaatggagcaattcacgaggcgaagga
aaactatttagtgtcgatttaattgatgaatcgggagaaattagagcaactgcctttcgt
gatcaagtcgaaaaattttatgatgtcttagaagttaacaaggtatattacataagtaga
tgcagtatcaagactgcaaataaaaactttacctccatcaagaatgattacgaaatgaca
tttactaacgaaaccgctgttgaaccttgtgatgatatagcatcattaccgaaagttagc
tttaacttcgtacgtattggcgacatcgagaatcaaccagctgaaagaatgatagatgtc
gttggcgttgtaaaaagtgctgatgacgttgttacgattaatacgaaatctaatagacaa
gtcaataagagagatatcgaattggttgatgattccggcaaagtcgtacgactgacactc
tggggcaccaatgcagaagaatttgatggttcacaatttcctgtcgttgcagttagaggc
gcgagagtgactgaatttggaggtcggtcattaagtgttgtgggttcaagccaacttatg
actaatcctgatatacctgaagcgcatatactacgtggctggtttgatgtgcaaggtaaa
gatcaagaattagtttcgatatcaacaaaacgcggagatattggatcccctggcttcagt
ggcaattggaaaaatattagcgacatccatggcgaaaatttgggacagcaagaaaaggcg
gattactttaacctcaaagccacaattatctacattcgcaaggaaaatttgatgtacaag
gcttgtcctaaagaagattgcaataagaaagtcattgatcaaggaggaagctaccgttgc
gagaaatgcaatcaaacattcccagatttcaagtatcgactaatgatatctgcttctata
gtagattctactggcagtaattggcttacattttttcaagagactggagaagctatgttg
aaatgtacagctcagcagttaggcgcgtggaaagaaaatgacgaaagtaaatatgaacat
accataaatgaagctttatttcagtcttacattctcaaagttagagctaaaatggaatct
ttcaatgatgaaaatagactcaaatgcagttgtgtaaacttgacaccaatggactatgtg
caacagtcacgacgtctgcttgaaggtattcgtcgcatgcaaatggtttag
DBGET
integrated database retrieval system
