Trichoplax adhaerens (placozoan): TRIADDRAFT_51100
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Entry
TRIADDRAFT_51100 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRIADDRAFT_51100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tad03041
]
TRIADDRAFT_51100
Enzymes [BR:
tad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
TRIADDRAFT_51100
Spliceosome [BR:
tad03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
TRIADDRAFT_51100
Complex C
U5 SnRNP specific factors
TRIADDRAFT_51100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
SNRNP200_wHTH
DEAD
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_22
AAA_19
T2SSE
PhoH
SLFN-g3_helicase
SWI2_SNF2
TcA_RBD
AbrB_C
GNT-I
AAA_11
AAA_25
Motif
Other DBs
NCBI-GeneID:
6758979
NCBI-ProteinID:
XP_002117767
JGI:
51100
UniProt:
B3SBW2
LinkDB
All DBs
AA seq
2140 aa
AA seq
DB search
MADATARSLQYDYRANSNLVLQADISLLEKRGRDESTGEVTSLSGHLVGTKMGDKAQRAK
PPTAEEAKPKRRKITSEKRQDILKSKQASLLSSDLFDMPNIYKPKTRATKSTYELMLNIV
QGSLGDQPREILVAAADEVLAALKNDKMRETEKAQAVRSLLGSILDERFSMLLNLSKKIS
DYGEEKETVEREENLEETGVAIQFDESDDEAEERYDDIKDEDSEEETEGVEAEFSGTLHK
GGRADDSSLDQETSRDCIEPRSIDAYWLQRELNKAYGDHMVSKKKAEEVLDILQNAGDDR
ECEHKLVIALGIDQFNFIRILRKNRMPVLYCTLLARAQSPAERQVIEAKMKDDPKLVDIL
RALSALDEEDLVQEEKSRKQAARAARIEAGVTNEDANQAAAVESKRMLLLEDIGFFEGSH
LMANKKCTLPDGSYRKARKGYEEVHVPALKPKPFDAGETLVPISVLPKYAQPAFDGYSSL
NRIQSRLVDRVLNSDENILLCAPTGAGKTNVALLSILREIGKNTDEDGTINTEAFKIIYV
APMKSLVQEMVGNFSKRLGSYGITVNELTGDHQLSKEQMDKAQVIVCTPEKWDIITRKSG
DRSFAQFVSLVIIDEIHLLHDDRGPVLEAIVARTIRQIEMTKEIVRLVGLSATLPNYEDV
ATFLRVKPSKGLFFFDNSFRPVPLEQKYIGITEKKPLKRFQAMNDIVYDKVIEHAGKNQV
LVFVHSRKETGKTARAIRDLCLEKDTIGKFLREDSASTEILRTEADQVKNNELKELLPYG
FAIHHAGMTRVDRTLVEDLFADKHVQVLISTATLAWGVNLPAHTVIIKGTQIYNPEKGRW
VELSALDVLQMLGRAGRPQYDAIGEGIVITNHSELQYYLSLLNQQLPIESQFITKLPDSL
NAEIVLGTVKNAKEAANWLGYTYLYIRMLRNPVLYSISNQEKENDTFLEQRRMDLIHTAA
SLLDKDNLIKYDKKSGNFQITELGRIASHYYCSRETISAYNKHLKPTSTEIELLRIFSLS
SEFKHITVREEEKLELQRLMERIPIPVKESIDEPSAKVSVLLQAYISQLKLDGFALAADM
VFISQSAGRLMRAIFEIALSRGWAQTVDKVLNLCKMIDRKMWQSMNPLHQFKKIPVDLVR
KIEKKDFPWERLFDLGHNEIGELIRKPKMGKTIYKYVHQFPRLDISAHIQPITRSMLKVE
VSISPDFQWDEKIHGKSEAFWIFIEDVDGEALLHSEYFLLKSKYASEEQVIKIFVPIFEP
LPPQYFIRVVSDRWLGCESVLPVTFRHLILPEKFTPPTELLDLQPLPVKALRNVAIEKFY
SEKNLTFFNPVQTQVFNALYNSNDNVFVGAPTGSGKTICAEFAITRLLNTQNDGKCVYVT
PFQSLAEKLYIEWMERFEKRLGKTVNILTGEISIDIKRLSTGNIIISTPDKWDILSRRWK
QRKAVLKVNLFLIDEAHLIGGEIGPSIEIICSRMRYISSQVEDPIRIIMLSSPIANASDL
AQWLGVSSSCLFNFHPNVRPTPLELHIQGFHTTHSPTRFITMIRPTYNTILKYSPSKPCI
IYVPSRRQTKLTALDIITYCTADGDAHRFLLCPIEKIENYLRHISDSTLKETLLHGIAYV
HEGLSDTELRIIEQLYDACYIQIVVISRKMSWNFNFGAHLVIVMDTQYYDGRNHTYVDYP
VTEVLQMVGKANRPMIDNAGVCVIMCQTSKKEFYKKFLYEPLPVESHLQHCFHDHLNAEI
VTKTIENKQDAVDYLTWTFMYRRMTQNPNYYNLQGVSHRHLSDHLSEFVETILDDLQQSK
CIAIEDDFDISPLNLGMIASYYYINYRTIELFSMSLAGKTKLRGLIEILASSAEYENIPI
RRHEERILAKLAQRVPYKLPDLKFNDSHNKTNLLLQAHMSRIQLPPELQMDTEDILNKAI
RLIRACVDVLSSNGWLSPALSAMEIAQMLTQAVWNKDSYLKQLPHFTSEIIKSCTEKGIE
SVFDVMDMEDGERNDLLQLDDKQMQDVARFCNRYPNIDVSYEVEDESNIISGSPATVKVQ
LSREDEVSGPVIAPFFPQKRDEGWWLVIGESEDNNLLSIKRLTLQQKADIKLDFIASGPG
KHSLKLLLMSDCYVGCDQEFIIDIVVGEDNETKSEFINED
NT seq
6423 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgccactgcaagatcactacaatatgattaccgagcgaattctaacctcgtt
ctccaagctgatatctcattgctggaaaagcgcgggagggatgaatcaactggtgaagtt
acttcgctctctggccacctcgtcggaacaaaaatgggtgataaagcccaaagagcgaaa
cctccaacagcagaagaagcaaaaccaaagcggcgtaagatcacgtccgagaagcgacaa
gatatccttaaatcaaagcaagctagtttattatcctctgatctattcgacatgccaaat
atctataaacccaagacgagagcaacaaagagcacttacgaactgatgctaaatattgtt
caaggatcacttggagatcaacctcgagaaattttagttgctgccgctgacgaagtgcta
gcagcattaaaaaatgataaaatgagggaaactgaaaaagctcaggcagttcgatcactg
ctaggctctattctagacgaacgtttttccatgttattgaatttgtctaagaaaatctca
gactatggagaagaaaaggaaactgtcgaaagagaagaaaaccttgaagaaactggtgtt
gctatacaatttgatgaatctgatgatgaagctgaagaacggtatgacgatatcaaagac
gaagattctgaagaagaaaccgaaggagtggaagccgaatttagtggtacgttgcacaaa
ggtggaagagcagacgacagtagccttgatcaagagacctcgcgggattgcattgagcca
cgcagcattgacgcttattggttgcagcgtgaacttaataaagcttatggtgatcatatg
gtatccaaaaagaaggctgaagaagtccttgatattttgcagaatgctggcgatgaccgt
gaatgtgagcacaaattggttatagctcttggaattgaccagtttaattttatccgaatt
ctccgcaaaaatcgtatgcctgtattatattgtacgttactagctcgtgcacaatcgcct
gctgaaaggcaagtcattgaagcaaaaatgaaagatgatcctaaattagtggatatattg
cgagctttatcagctcttgatgaagaagatctcgtccaagaagaaaaaagtcgtaaacaa
gctgcccgtgctgctagaattgaggctggcgtaaccaatgaagatgctaatcaagccgct
gcagtcgaatccaagaggatgttgttactagaagatataggattttttgaaggcagccat
ttaatggcaaataagaagtgtaccttacctgatgggtcatatcgtaaagcaaggaaaggt
tatgaagaagtccatgttcctgcattgaagccgaaacctttcgatgctggagagactttg
gttcctataagtgttcttcctaaatatgctcagcctgcatttgatgggtactctagtctt
aatcgtatccaaagtcgcttggtcgatagagttctcaactctgacgaaaatatcttactc
tgtgcaccaacgggtgctggaaaaaccaatgtggcactgttatcgattctacgagaaatt
ggaaaaaatactgacgaagatggaactataaataccgaggcgtttaaaataatttacgtt
gcccccatgaaatctctagttcaggaaatggttggcaatttttctaagcgactaggttcg
tatggcattaccgttaatgagttgactggtgatcatcaactaagcaaggaacaaatggat
aaagcccaggtgatcgtatgtactccagaaaaatgggatataataactcgcaaaagtgga
gatcgctcattcgcgcaatttgtgagcttagtaataattgacgagatacatttactacac
gacgatcgtggccctgtattggaagcgatagtggcgagaacaattcgtcaaatagaaatg
actaaggagattgtaagactggttggacttagtgctacattaccgaattatgaagatgtt
gctacattcctacgtgtaaagccttcgaaaggcctattcttctttgacaacagctttcgt
ccagttccacttgagcaaaaatatatcggaatcactgaaaagaaaccattaaaacgattt
caggctatgaatgacattgtctacgataaggttattgaacatgcaggcaaaaatcaggtt
ttggtattcgttcattccagaaaagaaaccggaaagactgctagagccataagggatttg
tgccttgaaaaggataccatagggaaattcttgagagaagattctgctagtacggaaatt
ttaagaaccgaagctgatcaggtcaagaacaatgaactcaaggaattactaccttacgga
tttgctattcatcatgctggaatgacaagggtcgatcgtacgctagtagaggatttattt
gctgacaaacatgtccaagtattgatctcgaccgcaactctcgcttggggcgtaaattta
cccgcacatactgttattattaagggaacacagatttataatccagagaaggggcgctgg
gttgagctgagcgctttggatgtcttgcaaatgttaggtcgtgcgggtagaccacagtac
gatgctattggagagggtatcgtgataacgaatcatagtgaattgcagtactacttatcc
ctattaaatcaacaattaccgattgaaagtcaattcattactaaattaccggatagtctt
aatgcggaaatagtacttggtactgttaaaaatgctaaggaagcggctaattggttgggt
tatacctacctatatatccgtatgcttagaaaccctgtcttgtacagcatttcgaatcaa
gaaaaagaaaacgacactttccttgaacaacgtcgcatggatttaattcatacagcagct
tcactattggataaagacaacctaataaaatatgataaaaaatctggcaattttcaaatc
actgaattaggaagaattgctagtcattattattgcagcagagaaacgatttctgcatat
aacaaacacctgaaaccgacctcaactgaaatagagttattgcgcatcttttccttatcc
tcagaatttaagcacattacagtgcgagaggaagaaaagctcgaattacagcgcctaatg
gaaaggattccgattcctgtcaaggaaagtatcgacgagccaagtgcaaaggtcagcgta
ttactacaagcgtatatttcgcaactaaagcttgatgggttcgctcttgccgcagatatg
gtttttatatctcaatctgcaggtcgattaatgagagctatattcgaaattgctttgagt
cgtggttgggctcaaaccgttgataaagttttaaatctgtgcaaaatgatcgatagaaaa
atgtggcagtcaatgaatcccctacatcagtttaaaaagattcccgtagatttagttaga
aaaatagagaagaaagacttcccctgggaacgcctttttgatctcggccacaacgaaatt
ggagaattaatacgaaaacctaaaatgggtaaaacgatatacaaatatgttcaccaattt
ccgaggctggatattagtgctcatattcaacccataacccgctcgatgctgaaggtggag
gtatcaatttcgccagattttcagtgggatgaaaaaatacatggaaaatcagaggctttc
tggatatttatagaagatgtcgatggtgaagcattgctccacagcgagtattttttactg
aaaagtaaatatgctagcgaagaacaagttataaagatttttgtcccgatatttgaacct
cttcctccacagtattttattcgagtagtgtctgatcgttggctgggttgtgaaagtgta
ttacctgtaaccttccggcatctaattcttcccgaaaaatttacaccgccgacagaatta
ttggacttacagcctttaccagtaaaagcattgcgaaatgttgctattgaaaagttctac
agtgaaaaaaatttgactttttttaatcctgttcaaacacaagtatttaatgcgttgtac
aatagcaatgataatgtcttcgttggggcacctaccggcagtggtaaaacgatatgtgct
gaatttgctataacgcggcttcttaatacccaaaatgacggaaaatgcgtttatgtcacg
cctttccaatcactagctgaaaaactctatattgaatggatggaaagatttgaaaaacgt
ctcggaaaaacggtcaatattttgactggagagatcagcatcgacataaaacgattaagt
acaggcaatataattatcagcactcccgacaaatgggatatactttcgagaagatggaaa
caaaggaaagctgtattaaaagtgaatttatttctaattgatgaagctcatcttattggt
ggggaaatagggccatcgattgaaattatttgttctcgaatgaggtacatctcatcgcaa
gttgaagacccaatacgcattattatgcttagttcacctattgcaaatgcatctgatttg
gctcagtggcttggtgtcagcagtagctgcttgtttaactttcatcctaatgtaaggcca
acgccgttagagttgcatatacaggggtttcacactacccattcgccaacccgatttata
acaatgattaggccaacttacaatacgattttgaagtattccccttcgaaaccttgtatt
atttatgtaccatctcgacgacagacaaaacttacggctcttgatataataacttattgt
acagccgacggggatgcacatcggttcttactttgtccaatagaaaaaattgaaaattat
cttcgtcatatctcagacagtacgttaaaagaaactttgttgcatggcattgcgtatgta
cacgaaggtttgagtgataccgaactaagaataatcgagcaactatatgatgcttgttac
atacagattgtcgttatctctagaaaaatgagctggaattttaattttggagcccacttg
gtaattgttatggacacccaatattacgatggtagaaatcacacgtacgtcgactatcca
gtaacagaagtcctacagatggttggaaaagctaacaggccaatgattgataatgcaggt
gtttgtgtgatcatgtgccaaacatcgaaaaaggaattctataagaaatttctttacgaa
ccattaccggtagagtcccatttacaacactgctttcatgaccatctcaatgctgaaatt
gttacaaaaacaatcgaaaacaagcaagatgctgtagattacttaacatggacttttatg
tatagacgaatgacgcaaaaccctaactactacaacctgcaaggggttagccatcgacat
ctgtccgaccatttatcggaattcgtagagactatcttagacgatttacagcaatccaag
tgcattgctattgaggacgattttgacattagcccgttgaatcttggtatgattgcatcc
tactactatatcaattacagaacaatcgagcttttcagtatgtctcttgctggcaagact
aaactacgcggtttaatagaaattttggcttcgtccgccgaatatgaaaatataccaata
agacgccatgaagaaaggattctggccaagttagcacaacgcgtcccatataaattgcct
gacctgaaatttaacgactctcataataagacgaatcttctactacaagctcatatgtca
cggatacaactacctccggagcttcaaatggatactgaagacattctaaataaggctatc
cgtttgattcgcgcatgcgttgatgtcttaagcagtaacggatggttaagcccggcttta
tctgccatggaaatcgctcaaatgttaactcaggctgtctggaataaagattcctacctt
aaacaattgccacatttcacatcagaaattattaaatcatgcactgaaaagggcattgaa
tctgtctttgatgtaatggacatggaagacggggagagaaacgatttattacaactcgat
gataagcagatgcaggacgttgcaagattttgtaatcggtatcccaatattgatgtatct
tatgaagttgaagacgaaagcaatattattagcggatcaccagcaactgtgaaagttcaa
ttaagcagagaagatgaagttagcggtccagtaatagcaccattctttccacaaaaacgc
gacgaaggctggtggttagttattggggagtctgaagacaacaacctgttgtccataaaa
cgactaacattacagcagaaggccgacatcaagcttgactttatagcatctggacctggt
aaacatagcctgaagcttttattaatgagcgattgctatgttggatgcgaccaagaattt
atcattgacattgtcgttggtgaagataacgaaacgaaaagcgaatttattaacgaagat
taa
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integrated database retrieval system
