Trichoplax adhaerens (placozoan): TRIADDRAFT_52629
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Entry
TRIADDRAFT_52629 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRIADDRAFT_52629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tad03019
]
TRIADDRAFT_52629
Messenger RNA biogenesis [BR:
tad03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
TRIADDRAFT_52629
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_TT21
ARM_TT21_N
TPR_2
TPR_12
TPR_1
TPR_7
Motif
Other DBs
NCBI-GeneID:
6750237
NCBI-ProteinID:
XP_002109023
JGI:
52629
UniProt:
B3RJH6
LinkDB
All DBs
AA seq
627 aa
AA seq
DB search
MSESIKANSEDHKEGKNDRSSNGILASDDERVLAQKALLQFHSRKYEECLRTINELLEIR
QNDPKVCHNLGVAQFYKSSCTKLDELTKVFDSVLIQPRYEFLPTWFSGENGEDQDSVDEF
DQAALNYNKALILYFFRQYEKASDIIEGLFKIIEPLDENLACKICFLAADLSFATRQANM
AGEKLAYIEKMITSSEKGSTNQHHEKSETFFTVGGGTKHGLQSESLQMKFNQMKKHNLAA
LYCKKAMNVNEECIQKPNDSGNINSLSAVQALNRHYELLYNIGIELLFSNRPLPGFEALI
QCMQAFNTDPKYWFRIAECCISAYRMGEEEIAAKAQNKSYIVSTVVGVGQHQKTVLKPTA
DYSYRYLPPSHGISVANPEPSLKFALPCLKNALLLLSSVNYNNNDQAIQRNDNSRSRAKV
YFSPSAAGMNAHDIIALRYAILAAIAFVSLQLGELVLALERSKELLALPSLPGLYRYLGH
MYAAEALIRLNKIDEAVQHLSPETITDISCSFSTQPETTSENKTEADNISSAATRHKFPR
TIESARALMFVNLASAYCLQRKPEKARKCIEQASVLRLEKEHIPGAVLISIYIELANGNV
ASALEVLKRQQLYPFQRNNGSKNIRNS
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaagtattaaagctaatagcgaagaccataaagaaggcaaaaatgatcgttct
tccaatggaattctcgcctcggacgatgaaagagtattagctcaaaaggcgctcttacaa
tttcattctcgtaaatatgaagaatgtttacgaacaatcaatgaattgttagaaattcgt
caaaatgatcccaaagtctgtcacaatctaggagtcgctcaattctataaatctagctgt
accaaattggatgaattaacaaaagtcttcgacagtgtcttaattcagcctcgttatgag
tttttacccacgtggttttcaggtgaaaatggtgaagatcaagatagtgtggatgaattt
gatcaggctgctttaaactacaataaagctttaattctctatttttttagacaatacgaa
aaagcttctgatattatcgaaggtttattcaaaattattgaacccttagacgaaaatcta
gcctgtaagatttgttttcttgctgcagacttaagttttgcaacacggcaggcaaatatg
gccggtgagaaactagcatatattgaaaaaatgattacctctagcgaaaaaggatcaaca
aatcaacatcatgaaaaatctgagacctttttcacagtgggcggtggaacaaagcacggt
ttacaatcagaaagcttacaaatgaagtttaatcagatgaagaagcataatttggctgct
ttatactgtaagaaggcaatgaatgtcaatgaggaatgtatacaaaagcccaatgatagt
ggtaacattaatagtctatcagcggtccaagctttaaatcgtcactatgaacttttgtat
aatattggtattgaattactgttttctaatcggcctcttccgggattcgaagctttaatc
cagtgtatgcaagccttcaacactgatccaaaatattggtttcgtatagctgaatgctgt
attagcgcataccgtatgggtgaagaagaaattgctgccaaagctcaaaataagagttat
atagtcagcactgttgtaggagttggccaacatcaaaaaacagtcttaaaacctactgca
gattattcgtatagatatttgcctccttcccatggtatttctgttgctaatcctgaaccg
tcattgaaatttgctcttccatgtttaaaaaatgcgttgctcttgttatcaagtgtaaat
tataataataatgatcaagcgatacaaaggaacgacaattcacggtcaagggcaaaagtt
tacttttccccttccgctgctggaatgaatgcgcatgacatcattgcgctaaggtatgca
attcttgctgccattgcattcgtttcgttgcaattgggagaacttgtcttagctttagaa
cgtagtaaagagttacttgccttgccttctctacctggattatatagatatctgggtcat
atgtacgcagcagaagcgttaatacgtttgaataaaattgatgaggcagtacagcattta
tcgccggaaacaattactgatatctcttgttcattttcaacacaacccgaaacaacgtca
gaaaataagactgaagccgataacattagctcagcagcaacacgacacaaatttcctaga
acaatagaatctgctcgtgcattaatgtttgtcaatttagccagtgcatattgcttgcag
agaaagccagagaaagcccggaagtgtatagaacaggcatcagtacttcggctagaaaaa
gagcacatacctggagctgttctgatttcgatctatattgagcttgcaaatggtaatgtg
gcttctgcattggaagtcctcaaacgtcagcagttatatccgtttcaaagaaataatggt
agtaagaatatacgaaatagttaa
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