KEGG   Trichoplax adhaerens (placozoan): TRIADDRAFT_53642
Entry
TRIADDRAFT_53642  CDS       T01069                                 
Name
(RefSeq) hypothetical protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
tad  Trichoplax adhaerens (placozoan)
Pathway
tad03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tad00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    TRIADDRAFT_53642
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tad03021]
    TRIADDRAFT_53642
   03019 Messenger RNA biogenesis [BR:tad03019]
    TRIADDRAFT_53642
Transcription machinery [BR:tad03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     TRIADDRAFT_53642
Messenger RNA biogenesis [BR:tad03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     TRIADDRAFT_53642
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus zf-CCCH_3 zf-CCCH_2 zf-CCHC zf-CCCH_4 zf-CCHC_6
Other DBs
NCBI-GeneID: 6751283
NCBI-ProteinID: XP_002109523
JGI: 53642
UniProt: B3RPS1
LinkDB
AA seq 257 aa
MESIIANVDNIKFTIEFELDDQIGTQQLPFPGMDKSGAAVCTYFAESQCVKGSMCPFRHT
KGDKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECQYLHINPESK
IKDCPWYDRGFCKHGPACRHRHVRRVACLNYLNGFCPEGSNCKHVHLRFELPTREIDIHS
ESKRKPSVVVCHNCGEYGHKASACPNQLISIQKENSLTNDNGNSIGISHDQNQQQQKRPM
DQVICFKDSSSLRFIYR
NT seq 774 nt   +upstreamnt  +downstreamnt
atggagagtatcatcgccaatgttgataatatcaaatttactatcgaatttgagctcgat
gaccaaatcggaacacagcaattaccctttccaggaatggataaatctggggcagctgta
tgcacctatttcgcagaaagtcaatgcgtaaaagggtcaatgtgccctttccgtcatact
aaaggcgataaaactgtcgtatgcaaacattggctgcgagggttatgcaagaaaggtgat
cagtgcgagttcttgcacgagtacgatatgaccaaaatgcctgaatgttatttttattca
aaatttggtgaatgtagcaataaagagtgtcagtacttacatatcaatccagaaagtaaa
attaaagattgtccgtggtatgataggggtttctgcaaacatggcccagcatgtagacat
cgacacgtaagaagagttgcttgcctaaattaccttaatggtttctgccctgaaggatca
aactgtaaacacgtacacttaaggtttgaactacctacgagagaaatcgatattcattct
gaatctaaacgtaaacctagcgtagtagtttgtcataattgtggagagtatggacataaa
gcctccgcttgtcctaatcagcttatctctattcaaaaggaaaatagcctaaccaatgat
aatggtaacagcattggcatatctcacgaccaaaatcaacaacaacaaaagcgccctatg
gatcaagttatctgtttcaaggatagttcctcattgagattcatttaccgatag

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