Trichoplax adhaerens (placozoan): TRIADDRAFT_53808
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Entry
TRIADDRAFT_53808 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K10980
non-homologous end-joining factor 1
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
TRIADDRAFT_53808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tad03400
]
TRIADDRAFT_53808
DNA repair and recombination proteins [BR:
tad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
TRIADDRAFT_53808
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XLF
XLF_CC
Motif
Other DBs
NCBI-GeneID:
6750826
NCBI-ProteinID:
XP_002110140
JGI:
53808
UniProt:
B3RQ81
LinkDB
All DBs
AA seq
342 aa
AA seq
DB search
MAAEMEWRRNRQGDLNSQSWHPFEINSKVYLIKSYFSEEDYEVCLYDPNYGLWSERLDQM
DIRKRCKVLNPNVEAPLHQILKHISKSIEIQKPDINYSLEFQDNQEGDQMVMFSFSTLLA
GLPFNWTFHCELAHLQELDLHLIQPLWMMISELLRRQEELKKIIVNKDREIDDYKSTGAR
CSRKQLETSKFDEKSFTNEMITSKDFEDQIRTGTSKFVATKVSELYKQLMIKKTWLQVRD
SYNFDQAFENSLYDMSGTQRESAAVTGGAGSWLNKLPPSLMPNESISPEKKSPIKKQKAT
ISPQVTPQKEENAELKRRLELEQKLAKNAEKVAAKKKKKLKF
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgaaatggaatggagacgaaatcgacaaggggatctcaattctcaaagttgg
catccatttgagattaactctaaagtttacttaatcaagtcgtatttttctgaagaagat
tacgaagtttgtttatacgatcctaattatggattgtggtcagagagattagatcaaatg
gatattaggaaacggtgcaaggtacttaatcccaatgttgaagctccattacatcaaatc
ctgaaacatattagcaagtcgattgaaattcaaaagcctgacataaattacagtttggaa
tttcaagacaatcaggaaggcgatcaaatggttatgttcagttttagcactctcctagct
gggcttccatttaactggacattccattgcgagcttgctcatctccaagagttagatttg
catttgatacaaccattatggatgatgattagtgagttgctgagaagacaggaagagctg
aaaaaaatcatcgtaaataaggatagagagatcgacgattacaaaagtactggggcaaga
tgctcaagaaaacaattagaaacttctaaattcgacgagaaatcttttacgaatgaaatg
ataacatcaaaggattttgaagaccaaattcgaactggtacatcaaaatttgtagctacc
aaagtatcggagctgtacaaacaattaatgattaaaaagacatggcttcaagtcagagat
agttacaattttgatcaagcttttgaaaatagcttgtatgatatgtcgggcacccaaaga
gagtctgccgcagtcactggcggagctggctcatggcttaataagttaccaccctcttta
atgccaaatgaaagtatctcgcccgaaaagaaatcccctataaaaaagcagaaagcgact
atatctccacaagttacacctcaaaaggaggaaaatgcagaactaaaaaggcgtctagaa
ctagaacagaagctggctaaaaatgcggagaaagtggcagcgaaaaagaaaaagaaatta
aaattttaa
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