KEGG   Trichoplax adhaerens (placozoan): TRIADDRAFT_54034
Entry
TRIADDRAFT_54034  CDS       T01069                                 
Name
(RefSeq) splicing factor 3B subunit 1
  KO
K12828  splicing factor 3B subunit 1
Organism
tad  Trichoplax adhaerens (placozoan)
Pathway
tad03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TRIADDRAFT_54034
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tad03041]
    TRIADDRAFT_54034
   03036 Chromosome and associated proteins [BR:tad03036]
    TRIADDRAFT_54034
Spliceosome [BR:tad03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    TRIADDRAFT_54034
 Complex B
    TRIADDRAFT_54034
 Complex C
   U2 SnRNP specific factors
    TRIADDRAFT_54034
Chromosome and associated proteins [BR:tad03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    TRIADDRAFT_54034
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT Htt_N-HEAT_1 HEAT_ECM29 HEAT_2 XMAP215_CLASP_TOG Cnd1 CEP104-like_TOG
Other DBs
NCBI-GeneID: 6751990
NCBI-ProteinID: XP_002110238
JGI: 54034
UniProt: B3RQX5
LinkDB
AA seq 1222 aa
MASVGDIEKQIEDLQRNRSNLNEKEEKVGLGSKGHFDKDIYGDSSTKTGYVTSLPLNEAE
EDEDDYSVSNTLNKRATYSAPQALLNDVPMQDKDYDPLAEYRHSRVADRDDEYRARRRNL
IISPERHDPFADGGKTPDPKARTYIDIMQEQGLKKEEAEIIKKIHDNQETAPGAQVNGSA
KAEKRKRRWDQPATETTPTAKKTSWEQAETPSVSRWDETPARSKGGETPSVRVWDATPTH
TAPGAATPGSVSARKRNRWDETPKADQVTGETPGHGSSAWAETPGIDRSSGEPIGDTPSA
KRRSRWDETPVNQMGGATPVFNSGVTPSGTAAMAMPTPSPANLVAMTPEQMQAFRWEKEL
DERNRPLSDDELNGLFPKEGYKVVAPPAGYQPIRTPARKLLATPTPMGGASTGFFMQDEK
TSGSSKVVEDLQPAGNLPYLKPDDVQYFGKLLTEIDENLLSPEEAKERKIMKLLLKIKNG
TPPMRKAALRQITDKSREFGAGPLFNQILPLLMSPTLEDQAAGLATMISTMRPDIDNIDE
YVRNTTARAFAVVASALGIPSLLPFLKAVCRSKKSWQARHTGIKIVQQISILMGCAILPH
LRSLVEIIEHGLVDEQQKVRTITALALAALAESATPYGIESFDSVLKPLWKGIRNHRGKG
LAAFLKAIGYIIPLMDAEFANYYTREVMIILIREFQSPDEEMKKIVLKVVKQCCSTDGVE
PQYIKEQILPPFFKHFWNQRMALDRRNYRQLVDTTVEIANAVGAAEIISRVVDDLKDESE
QYRKMVMEAIDKIMANLGAADIDSRLEEQLIDGILYAFQEQTQEDAVMLNGFGTVVNSLG
TRVKAYLPQICGTVLWRMNNKSAKVRQQAADLISRIAVIMKTCGEEKLMNHLGVVLYEYL
GEEYPEVLGSILAALKAIVNVIGMNKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRI
ADRGAEFVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPQDVLATLLNNLK
VQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMG
KDYIYAVTPLLEDALMDRDLVHRQTASSVVKHMSLGVVGFGCEDALTHLLNYVWPNIFET
SPHVINAVMEAIDGLRVGIGPTKVLQYTLQGLFHPARRVREVYWKIYNNLYIGSQDALIG
SYPRVENEEKNSYYRYFLDYTL
NT seq 3669 nt   +upstreamnt  +downstreamnt
atggcttccgtcggagacatcgaaaagcaaatcgaagatttacagcgcaataggtccaat
ttgaatgagaaggaagaaaaagttggcttaggatcaaagggtcacttcgacaaggacatc
tatggtgattccagtaccaagactggctacgtaacatctcttccgttaaatgaggccgaa
gaggacgaagatgactattccgtgtctaatacccttaataaaagagcaacatactctgct
ccacaagcgcttcttaatgacgtcccaatgcaagataaggactacgatcctttagctgaa
tatcgtcactctcgtgttgctgatcgtgacgatgaatatcgtgctagaagacgaaatttg
ataatttctcccgaacgacatgatccctttgcagatggagggaaaactccagatcctaaa
gctaggacctacattgatattatgcaagagcaaggtttaaagaaagaagaagctgagata
atcaagaaaattcatgacaatcaagagactgctccaggcgcccaagtaaatggtagcgct
aaagcagagaaacggaagcgacgttgggatcaaccggctacggaaactacacctacagcc
aagaaaacgtcctgggaacaagctgaaacaccctctgttagccgatgggatgagactcca
gctaggtcgaaaggtggcgaaactccttccgtcagggtgtgggatgctacaccaactcac
accgctcctggagccgcgactcctggttctgtatcagcacgtaagcgtaatagatgggac
gaaacgcctaaagcagatcaagtaacgggagaaactcctggtcatggcagcagtgcatgg
gcggaaacaccaggaattgatcgctcttctggtgagccaataggcgacacgcctagtgca
aaacgaagatctcgttgggatgagacaccggtgaatcaaatgggtggagctactcctgtt
tttaacagtggtgtgactccaagtggtacagcagcaatggcaatgcctacaccatctcca
gccaatctcgtcgcgatgactcctgagcaaatgcaggccttccgatgggagaaagaatta
gatgaacgtaatcgcccactaagtgatgatgaattaaatggcttatttccaaaggagggt
tataaggttgtagcgcctccagccggatatcagccaattcgtactccagctcgtaaatta
cttgctacaccaacaccgatgggtggagcatccacaggttttttcatgcaggatgaaaag
acttctggatcctctaaagttgtagaagatttacaacctgctggaaatcttccttatttg
aagccagacgatgttcaatatttcggaaaattgttgactgaaattgacgaaaacttacta
tcaccagaagaagcaaaagagagaaaaattatgaaacttttactaaagattaagaacggc
acacctcccatgagaaaagcagcactacgacaaataactgataaatctcgagaatttggt
gctggtccattatttaatcaaattttgccattattaatgtctcccaccttggaagatcag
gccgctgggcttgctactatgatctctactatgagacctgatatcgataatattgacgaa
tatgttcgtaacaccactgctagagcttttgctgtagttgcttctgccttaggtattcca
tctttattgccatttttgaaggctgtatgtcgcagtaaaaagtcctggcaagctcgtcac
actggaataaaaatcgtacagcaaatttctatattgatgggatgtgctattttaccgcat
ctaagaagtttagtagagattatcgagcatggactagttgatgaacagcagaaggttaga
actattacagctctcgctttggctgctttagcagaatctgctaccccatacggtatcgaa
tcatttgatagtgttttaaaacctttgtggaaaggtatcagaaaccatcgtggcaagggt
ttagcggcatttttgaaggccatcggttacattataccccttatggacgcagagtttgct
aattactatacccgtgaggttatgatcatcttaattcgtgaatttcagagccctgatgaa
gaaatgaaaaaaatcgtattaaaggttgtgaagcaatgttgttctacagatggtgtagag
ccacagtatattaaggaacagatattaccaccgttttttaagcatttctggaatcagcgg
atggccttagatagacgcaactatagacagctggtcgatactacggttgaaattgcgaat
gcagttggtgctgcagaaataataagtagagttgtagatgatttaaaagatgaatctgaa
cagtacagaaaaatggttatggaagctatagataagattatggcaaatcttggagctgca
gatatcgattctcgattagaagaacaattgattgatggtattttatatgctttccaagaa
caaacacaggaggacgccgttatgttaaatggttttggtacagttgtgaactctctagga
actcgtgttaaagcttacttgcctcaaatttgtggtacagtcttgtggagaatgaataat
aaatctgctaaagttcgccagcaagccgctgatttaatatccagaattgcagtgattatg
aaaacatgtggtgaagagaaacttatgaaccatttgggagttgtattatatgaatatctt
ggtgaagaataccctgaagtacttggtagcatactggctgctcttaaggctattgtaaat
gtaattggtatgaataagatgacaccaccaattaaggatctcttacctcgcttgacaccc
atcctaaaaaacaggcatgaaaaagttcaagagaactgtatcgatctcgttggtcgtatc
gctgatcgaggtgctgaattcgtatctgctcgagaatggatgcgaatctgctttgaattg
ttggaacttttgaaagctcataagaaagcaattcgtcgagcaacagtaaatactttcggt
tatatcgctaaagctattggtccacaagatgttttagctacgctcctcaacaatcttaaa
gtgcaggaacgtcaaaatcgtgtgtgtacaacggtagctattgcaatcgtggcggaaaca
tgttcaccatttactgtcctccctgctctcatgaatgaatatagagtacctgagctgaat
gtacaaaacggggttttaaagtcactatctttcctttttgaatatattggtgaaatgggc
aaagattacatttatgctgtcactccattgctagaagacgcgttaatggacagagattta
gttcacaggcaaaccgcatcttctgttgttaagcacatgtctttgggtgtagtaggattc
ggttgtgaagatgcgttaacccatctattaaattatgtatggccgaacatttttgaaact
tcacctcacgtaattaatgctgtcatggaagcaatagatggtcttagagttggtattggc
ccaacgaaggttttacaatatactctgcagggcctctttcatcccgctcgaagagttcgt
gaagtgtactggaagatttataacaatttgtacatcggatctcaggatgcacttattgga
tcttatccccgggttgaaaacgaagagaaaaattcctactatcgctatttcttagactac
actttataa

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