Trichoplax adhaerens (placozoan): TRIADDRAFT_54089
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Entry
TRIADDRAFT_54089 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K11125
protein SMG5
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TRIADDRAFT_54089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tad03019
]
TRIADDRAFT_54089
03032 DNA replication proteins [BR:
tad03032
]
TRIADDRAFT_54089
Messenger RNA biogenesis [BR:
tad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
TRIADDRAFT_54089
mRNA cycle factors
Common to processing body (P body) and stress granule
TRIADDRAFT_54089
DNA replication proteins [BR:
tad03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
TRIADDRAFT_54089
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
DUF412
Motif
Other DBs
NCBI-GeneID:
6751481
NCBI-ProteinID:
XP_002110266
JGI:
54089
UniProt:
B3RR29
LinkDB
All DBs
AA seq
895 aa
AA seq
DB search
MSRAHNLNKADCRRLYRNGVDIAHRVDHSIKEISIAALLQPPHVDHRLRLRAICEQLLLS
DDEDMGKMIEDVMWKKELHEDLDTKTAFANYLLSAIDFYKSFLRKLGQAFNIDLTCVFLD
NIDSTDDDTETAAITITSPKVDWAKDASGRCLIYIGDLARYYTDYDSVKGHEIALEHYHK
AMCFRPDWGISHNQLGTLHVNFNFGLDTIYYYMRCLYSTVPFDGIINNVKRHISKTYKEM
LQMLQYGEPETITREYILKRLVINFIYLNSNLSPNTSMTIEQLNELCEKVIKDFKEYTAY
GFEFCENESLYSVKPDADYDLVDCNILFKLLAVLYMSEYNLSQMGAPQETISVAIIIAVL
TRIAQCVTYYITYGENEQDLDDNDSASNALKTSEGSSDCHEMNNYNSDNDKDDPQTKKMK
AKKLLYKKARARRRRKTSDSEDESSDNNEDYSDSSFSGSISHHSDSESRSLQVSSSSEWS
TDSENSESELVTDTEENIIENNTASGEVQPVINVNNHTIGDVVDSTDTVNPEGSNRNDSE
CEVATDQPDFHVDIEKQRRLRKISNKLLNVLKIGTDWLISHEEVLDKYQEDLAQFWSDYA
TLLNCIIMTYPQAIQQNFDQIDPLPEDIYLLGFKPLERIHINIKPNSRNLQKIAKSDLPM
QGLIWVANECQFYGPLQLAEYKAEVTVQISKEEEDKAKAKRLQAMKMMAQMKLKSDVESL
EANVASRDANKGVTISPYLVPDAFAFCNSLRAIQDFSHSGQLVIIVPLAVVQSLDNMKKI
SAQARQAIKYLEVQFKKGNRWLRAQNDNEMSSKIKRRKNQGQENWIYEQIIDCCCYFSEG
KQNMVTLLTGIDLRNEEIAANKGLDSNMLELAKKQDVKIENIKLFTKKWKSYKRK
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgagctcataatcttaataaagcggattgcaggcgcttataccgcaatggtgta
gatattgcacatcgtgttgatcactccatcaaggagatctcgattgcagcacttttacag
cctcctcatgtggatcatcgtttgaggttaagagctatatgtgaacaattgctattgtca
gatgatgaagatatgggaaagatgattgaagatgttatgtggaagaaggaattacatgaa
gatctagatacaaagacagcgtttgcaaattatttgttatcagcaatagatttttacaaa
agctttttaagaaaactaggccaagcgtttaatattgatttaacgtgcgtattcttagat
aatattgacagtactgatgacgatactgagacagcagcaataacaattacatctccaaaa
gttgattgggcaaaagatgcaagcggacgatgcttaatttacattggagatctagctcgc
tactacacagattatgatagtgttaaaggccatgagatagctttggaacattatcataaa
gctatgtgttttcgtcctgactggggtatatctcataatcaactgggaaccttacatgtc
aattttaatttcggcctggacactatttattactacatgagatgtctatatagcacagta
ccttttgatggtatcattaataacgttaagcgccatatcagcaaaacctataaggaaatg
cttcaaatgcttcaatatggagaaccagaaacaattacgcgggaatatattttgaaaaga
ttagttattaattttatatatcttaacagtaatctaagtccaaataccagtatgacgatt
gaacaacttaatgaactttgtgagaaagtaataaaagattttaaagaatatactgcatac
ggttttgagttttgtgaaaacgaaagtttatactccgtcaaaccggacgcggattacgat
cttgtagactgtaatattctttttaagttactggccgttttatatatgtcagaatataat
ctgtcgcagatgggtgcaccccaggaaactatatctgttgcaatcattatcgctgttcta
actagaatagcccaatgcgttacgtactatataacctatggagagaatgaacaagactta
gatgataacgattcagcatcgaatgcactaaagaccagtgaaggatctagcgattgccat
gaaatgaataactacaatagtgataatgataaagatgatcctcaaactaaaaaaatgaaa
gcaaagaaactattatacaagaaagctagagctagaagacgacgtaaaactagtgattcc
gaagatgaaagtagtgacaacaacgaagattatagtgatagctcattttctgggagcata
tcgcatcatagtgattctgaatcgcgttcacttcaagtctcttcttcaagtgaatggtca
actgacagtgaaaacagtgaatctgaattagttacagatacagaggaaaatattattgaa
aataatacagcctctggagaagttcaaccagttataaatgttaataatcatacgattggt
gacgttgttgatagtactgatactgtaaatcctgaggggtcaaatcgcaatgactcagaa
tgtgaagttgcaaccgatcagccagattttcacgtggacatcgagaagcagcgaagacta
cgcaaaattagtaataaattgcttaatgttttaaaaattggaacagattggctgataagc
catgaggaagttctggataaatatcaagaggatcttgctcagttttggtctgattatgcg
acgctattaaactgcattatcatgacttatcctcaagcaatccaacaaaattttgatcaa
attgaccctttaccggaggacatctacttattaggttttaagcctttagaacgtattcac
attaatattaagcctaatagccgaaatttgcaaaaaatcgctaaatccgatctgccaatg
caaggtttaatttgggtagcaaatgaatgtcaattttatgggccgcttcaattagctgaa
tataaagcagaagttacagtacagataagcaaggaagaagaagacaaggcaaaggctaaa
cgccttcaagctatgaaaatgatggcgcaaatgaaattgaagtcagacgtagagtcactt
gaagctaacgttgcttcacgtgatgcaaataaaggagttacaatatcgccctatttagta
ccagatgctttcgcgttttgcaattctctcagagcaatccaagacttcagccatagcgga
caactagtcattatagtgcctctagcagttgtacagtcgcttgataatatgaaaaagata
agtgcccaagccaggcaggcaataaaatatttagaagttcaatttaagaaaggcaacaga
tggctaagagcgcaaaacgataatgaaatgtcttcaaagattaaaaggcggaaaaaccaa
ggccaagaaaactggatttatgaacaaatcattgattgctgttgttacttcagtgaaggc
aaacagaatatggtaacactattaacaggcattgacttacgaaatgaagaaatagctgca
aataaaggcttagattcaaatatgctagaacttgcaaaaaagcaagatgtcaaaatagaa
aacattaagctgtttaccaaaaaatggaaatcgtataagcgtaaataa
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