Trichoplax adhaerens (placozoan): TRIADDRAFT_54364
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Entry
TRIADDRAFT_54364 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
tad
Trichoplax adhaerens (placozoan)
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tad03041
]
TRIADDRAFT_54364
Enzymes [BR:
tad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
TRIADDRAFT_54364
Spliceosome [BR:
tad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
TRIADDRAFT_54364
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
Helicase_C
R3H
DEAD
OB_NTP_bind
Ank_4
AAA_22
Ank_2
HA2_N
AAA_19
ATPase
nSTAND3
Ank_5
PhoH
Motif
Other DBs
NCBI-GeneID:
6751619
NCBI-ProteinID:
XP_002110925
JGI:
54364
UniProt:
B3RRT9
LinkDB
All DBs
AA seq
1256 aa
AA seq
DB search
MAYRKRKYQTPNISQELQDRISAVINNFIADHTVQELEFPPSLLKEERAFIHQFCKPLGL
ISKSQGWGSERFLTVRRSGNLNDDAKITTLTLNGASKKGLTDLISQFPHGLDQYHGSQPE
EAIKSTVYSGQGHKLIFSSPRIPPHHYSTQQSLRHQLPIVHQRSQILAAIQSNKVIIVMG
ETGCGKTTQIPQYILEDGQATGKPCRIICTQPRRLSAIGVAERVAYERGEPIGSTIGYQI
RLESKISPDTCLLYCTTGILLRYLTLGAPFLDCITHIVVDEVHERDKLCDFLLITLRKLI
EQESNIKLILSSATLNSKLFSQYFFNCPILKVDGHTYPVEELYLEDILIRTKYISKLIPK
NIKQDTSSSLVQDKELNDNQAVKDKKKLVENDDGNINANQAMDNYLENAWIKNDDNSFRG
IIEMIENGHIHVDYQHSETSASSLMIAAGHGKLATIESLLQLSANVNLKSINGWTARDWA
LKWNRPEAVEKLDQFSMEKPSVMDVNYNRNSLLKLCTDSIQGEKIDYDLITHIISYICKE
DNKGAILVFLPGYEDIVNVKDRILQRKFSKHSRLKIRIFILHSLVEITRQREIFKSCPHD
VKKIILSTNIAETSITIDDVVDVIDSGRIKMKNFDALSSASSLTSAWISKANAKQRAGRA
GRCQPGRCYHIYSKSKYNSLSDYLRAEILRIPLQELALQVKLLNTNVSIAEFLNDAIEPP
SFIAVNNAVECLKAIGALDENENLTELVILPDESSDFIKIDYFKRTICNNIQSDHYLIVQ
VFEAALVAGLYPNIAKIDPSNCWLTAGYKQGRSIGNNRFYHRLKKIKIHRSSMLFGLLSA
KSATSKTHEMKANSNWFIYNDLLRNYTSTAAVGLTVTSAIVTYLFSGSPYPKKEEDYSAA
LNNIQKDLDVNGGKVLEEQRSQNQDIKEYKPTVTENMMDSENEAENIDVMEKIEIENSWI
SFTVAREEKNLLLAIKRMLLQAILRNLIQPGIHHTSEEQFIDSLQVILASEDKLTNLQEK
VHYLSALDSRQGGNNVNQSCRIRTDNKKQSGHVHNNNNRQRYTSMKGTTPIKKYSTKEEH
DQSESTKSKVGEFQSAKPLTIRNQSKRSNIRYFILKCYNENILPDAVSKESDKVMIIFSA
QRSKHFQGYAEMSSPIKKLSTPFTTPVPQYRTGIFDIKWIKIFNIPFHATKHLINPWNKG
KLVHICRGGQLYNETDFFLRLKCKLNGIDLIHTNLLPSLSGIEDFDTCSPYGRRSY
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggcctataggaaacgaaaatatcagacacccaatattagccaagaattacaggatcga
attagcgctgtgatcaataattttatcgccgatcacacagtacaagaactagaatttcct
ccatcgttactaaaagaagagagagccttcattcatcaattttgtaaaccgctaggtcta
atatcaaaaagtcaaggttggggatcagaacggtttttaaccgttagacgttctggaaac
ttgaatgatgacgccaaaattacaacattgacactgaatggcgcctccaagaaaggtctt
acagatttaatcagtcagttccctcacggacttgatcaatatcatggtagtcaacctgaa
gaagctataaaatcgactgtctacagcgggcaaggacataaactaatattttcatctccg
cgcattcccccacatcattattcaacacaacaatcacttcgtcatcaattaccgatcgtt
catcaaagaagtcaaattctagcagcgatccaatccaacaaggtgattatcgtaatgggt
gaaactggttgcggtaaaacaactcagatacctcagtatatattggaagatggtcaggct
acaggaaagccttgtcgtatcatttgcacgcaaccacgtcggttatcagcaattggagtt
gcagaaagagttgcttacgaacgtggagagccgataggatcaacgatagggtatcaaatt
cgtttggagagcaaaatatcccctgatacttgtttgctctattgtacaacgggaatttta
ttacgatatttgacattgggagcacctttcctagattgtataacccatattgttgtggat
gaggtacacgaaagggataaactatgtgactttttgctcataactctgcgtaagctaatc
gaacaagaatcaaatataaagttgattctatcaagtgcaaccctgaactcgaagctattt
tctcagtactttttcaattgtccaattttaaaagttgatggacatacataccccgttgaa
gaattgtaccttgaagacattttaataagaactaaatatataagcaaattaatccctaaa
aacatcaaacaagataccagttcctctttagttcaagataaagaattaaacgataaccaa
gccgtaaaagacaaaaagaaattagtggaaaatgatgatggaaatattaatgctaatcag
gctatggacaattatcttgaaaacgcttggattaagaatgatgataactcctttcgtggt
atcatcgaaatgatagaaaatggacatatacatgttgattatcagcattctgaaacgtcc
gcttcatcacttatgattgctgctggacatggaaaattggcaaccattgaatcgctattg
caattatccgctaatgttaatttaaaatccatcaatggatggacagcacgagattgggca
ttaaaatggaatcggccagaagctgtagaaaagcttgatcaatttagtatggagaagcct
tcagtgatggatgtgaattacaatcgtaactcacttctgaaattatgtacagactctatc
caaggagaaaaaatcgattatgatttaattacacatataatttcctatatttgtaaagaa
gataataaaggtgctatcttagtattcttacccggctatgaagatattgtgaacgttaag
gatagaattttacaaagaaaatttagtaaacatagcagattaaagatacgaattttcata
ctccattcattagtagaaatcacccgtcaaagagaaatatttaaatcttgtcctcacgat
gttaaaaaaattatattatctactaatattgccgaaacaagtattactattgatgatgtg
gtagacgttattgattctggaagaataaaaatgaaaaattttgatgctttatcgtctgca
tcatcattaacttctgcttggatatcgaaagccaacgcgaagcaacgagcaggaagagct
ggccgatgccaacctgggcgatgttaccatatatatagtaaatcgaaatataatagtttg
agcgattatttaagagctgaaattttgcgcatacccttacaggaattagctctacaagta
aaactcttgaatactaacgtttccatagcagaatttttaaatgatgctatagagccacca
tcttttattgcagttaataatgcggtggaatgcttaaaggctattggggcccttgatgaa
aacgaaaacctaacggaattagttatcctacccgacgaatcaagcgacttcatcaaaatt
gactattttaaacgaacaatatgcaataatatccaaagtgatcattacttaatagtacaa
gtttttgaggcggcccttgtagctggattatacccaaatattgctaaaatagatcccagt
aattgttggctaaccgcaggctacaaacaaggtcgatcaataggtaacaatagattctat
catagattgaaaaaaataaaaattcatcgttcgtcgatgttatttggacttttatcggca
aagtctgctacctcaaaaacacatgaaatgaaagcaaattccaattggttcatatacaat
gatctattgagaaattacacaagtactgcagctgttggtctaacagttacatcagccata
gttacttatttattttctggctcaccttacccaaagaaagaggaagattatagtgcggcc
ctaaataatattcaaaaagaccttgatgtcaacggaggaaaagtattggaagaacaaaga
tcacaaaatcaggacataaaggagtataaaccaactgtaactgaaaatatgatggatagc
gaaaatgaagcagagaatatcgacgttatggagaaaattgaaatagaaaatagttggatt
tccttcacagtagctagagaggagaaaaacctactattagctattaaaaggatgctactg
caagcgatattacgcaatttaatacaaccaggaattcatcatacttcagaagagcaattt
attgattccttacaagttattttggctagcgaagataaactaacaaacttacaggaaaag
gtacactacctatcagccttagatagccggcagggaggaaataacgtaaatcaatcatgc
agaattcgtactgataataagaagcaatcaggccatgttcataataataataatcgccag
aggtatacgagtatgaaaggtaccacacctatcaagaaatacagcactaaggaagagcat
gatcaatcagagtctacaaaaagtaaagttggagaatttcagtctgcgaagcccttaacg
atacgtaatcaaagtaaaagatccaatattcgttacttcatactaaaatgttataacgaa
aatatccttcccgatgctgtatccaaggaaagtgataaagttatgataatattttctgcg
caaagaagtaagcattttcaagggtatgctgaaatgagcagtccgatcaagaaattgagc
actccttttacaactcctgtaccacaatatcgcacaggaatattcgatataaagtggatc
aaaatattcaacattccatttcatgcaacaaagcatttaattaatccttggaataagggc
aagttggttcatatatgccgtggtggacagctttataacgaaaccgattttttcttacgt
ttaaaatgtaaacttaatggaatagacttgattcataccaacttattaccaagtttatca
ggtatcgaggatttcgatacctgcagtccatatggaagacgtagttattga
DBGET
integrated database retrieval system
