Trichoplax adhaerens (placozoan): TRIADDRAFT_55798
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Entry
TRIADDRAFT_55798 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K12589
exosome complex component RRP42
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRIADDRAFT_55798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tad03019
]
TRIADDRAFT_55798
Messenger RNA biogenesis [BR:
tad03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
TRIADDRAFT_55798
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
TRIADDRAFT_55798
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
6753313
NCBI-ProteinID:
XP_002112100
JGI:
55798
UniProt:
B3RVW2
LinkDB
All DBs
AA seq
288 aa
AA seq
DB search
MSSSTLSEGRKQFIVDGVTQDCRADGRRCIDFRRFQIETGIVSNTNGSARLRQYGTDVLV
GIKAEIGQPKQERSNTGHLEFYVDCSSYNTTEIDGHIGDFTTQLTKSLERIYDSENVLDL
KSLTIIAGEQVWVLYIDAVVLECCGNLLDCISIAVKAALYNTRIPGVSVNDEEGVLELEI
SDDPNDEKKLSIDKVPVIVSCNKIGHRYVVDATQEEECCSSGRLLIAVNDRNNICSLQKS
GTGSLDPSTIFEMIETARQAAVPLNQELLQTLKREERSNNDKCGFFAN
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctctaccctatcggagggtcgaaagcaatttatcgttgatggagtaacacaa
gactgccgagctgatggcagaagatgtattgactttagacgatttcaaatagagacagga
attgtctccaataccaatggttctgctcgtttacgtcaatacggtaccgatgtattagtt
ggaattaaagctgagattggtcaaccgaaacaggaaagatctaatacaggacaccttgaa
ttctacgtagattgttcatcatacaataccacggaaatcgatggacatattggagatttc
acaacacaattaacaaaatccctggaaagaatttacgattctgaaaatgtattagaccta
aagtcattgacaattatagctggagaacaagtttgggttctctacattgacgctgtggtt
ctggagtgctgcggtaacttacttgattgtatttctatcgcggttaaagctgctttatac
aacactcgaattcctggggtttcagttaacgatgaggaaggagtgcttgagttagaaata
tctgatgacccaaacgacgaaaaaaagttatcaatagataaagttccagttattgtcagt
tgcaataagattgggcatcgttatgttgtggatgcaactcaggaagaagaatgctgttca
tcaggccgtttgctcatagcagtaaatgatcgcaataacatttgttctctgcaaaagagt
ggtactggtagtttagatccgtcaaccatttttgaaatgattgagactgctagacaagca
gctgtccctctcaatcaggaattactgcagacattgaaacgagaagagcgcagcaacaat
gacaaatgtggattttttgccaactga
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