Trichoplax adhaerens (placozoan): TRIADDRAFT_55878
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Entry
TRIADDRAFT_55878 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TRIADDRAFT_55878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tad03021
]
TRIADDRAFT_55878
Enzymes [BR:
tad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TRIADDRAFT_55878
Transcription machinery [BR:
tad03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
TRIADDRAFT_55878
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
zf-tcix
Motif
Other DBs
NCBI-GeneID:
6753359
NCBI-ProteinID:
XP_002112146
JGI:
55878
UniProt:
B3RW43
LinkDB
All DBs
AA seq
941 aa
AA seq
DB search
MVKEQFKDLDVAKKLSHVTFGLFSSNDVQRQAHIRVVSKNLYGEDTQRSPVSYGVLDRRM
GTSSKNKSCETCRKGLADCVGHYGYLDLALPVFHCGFYKATITILQCICKKCSRVLLSPA
DYDQNLQIATRTRLGLQSRKALQKKVHEKCRKMAVCPSCGAINGIVKKAGSFKIIHEKHR
LNKKLSSIAISQTQDLLQDAVESNKDLENFVASKSQEILNPLLVLKLFSGMSDEDCLLVG
MKPNNGRPEDLIIERLLVPPLCIRPSVMTDSQMGSNEDDLTMKLTEIILISDYINRSRQN
GAKIQILMELWDNLQIHVSLYINSETSGLPYGSQPNRPIRGFCQRLKGKSGRFRGNLSGK
RVDYSTRTVISPDPNLRIDEVAIPYPVAMTLTYPQKVCRANIRFLKKLILNGADKHPGAN
FVMEEKTKLRKYLKYGNRGKIAKDLKAKIMPNRTFRFNECVCTPFNADFDGDEMNIHLPQ
TEEARAEALVLMQSKSNMVTPRSGEPLIAAIQDFITGAYLLTQKDVFLDRAKVSQFCSSM
LDSRTASTEIDLPVPSIIKPVQLWTGKQVISALLSPLDVVFAFCVLLDVVFHNGEHICGV
LDKSTLGSGSRSNRGFSIGISDVTPEINVINGKRELVKNGYDKCDQHIQDFKDGRLHNQP
GFTADETLEAVILRELSVIREDAGKICLKELHPSNAPLTMALCGSKGSNINISQMISCVG
QQAVSGRRIPNGFENRALPYFDRDSKVPAAKGFVENSFYSGLEPTEFFFHTMAGREGLVD
TAVKTAETGYLQRRLIKSLEDLAIRYDTTVRNSVGGIVQFKYGHDGLDPSLMESKDQPID
YNHLLYHIKAVSYFLRNYINRIASKQPQNRKYGPHTPILDHHITEIQLKQFIQSCGNKYV
RAKIEPGTAVGAIAAQSIGEPGTQMTLKTFHFAGVAAMNIL
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaggaacagtttaaagatcttgatgttgcaaagaaattaagccatgttaccttt
ggattattttcttctaatgatgtccaaaggcaggcacatattcgtgttgtcagtaaaaat
ttgtatggagaagatacgcaacgaagcccagtgtcctatggcgtactagatcgtcgtatg
ggtaccagctctaaaaataaatcgtgtgaaacatgtaggaaaggattggccgattgtgtt
ggacattatggatatcttgatttagccctccctgtcttccattgtggtttctacaaagct
actataaccattttacaatgtatatgcaagaaatgcagcagagttttattatcgcctgca
gattacgatcaaaatttgcaaatagccacacgcactcgccttggattgcaatctcgtaaa
gctttacaaaagaaagtacacgaaaaatgtcgtaaaatggctgtatgccctagctgtggt
gctataaatggcattgtaaagaaagctggttcatttaaaataattcacgaaaagcacagg
ctgaacaaaaaattatctagcattgcaattagccaaactcaggatttattgcaagatgcc
gtagaaagcaataaagatcttgaaaatttcgtcgctagcaagtcacaagaaatattaaat
ccgttattagtactgaaattatttagtggtatgagcgatgaggactgcttacttgttggt
atgaaacctaacaatggaaggcctgaagatctcattatagagcgattactggttccacca
ttatgtatcaggccatctgttatgaccgattcacaaatgggaagtaatgaggatgatttg
acaatgaaattgactgaaattatacttataagtgattatattaaccgctctcgtcaaaat
ggagctaaaattcagattttaatggaactatgggataacttacaaatacacgtttccctt
tacataaatagtgaaactagtggtttaccttacggatctcagcccaatcgaccgattaga
ggtttttgccaacgcctgaaaggtaaatctgggcgctttcgcggaaatttatctggtaaa
agggttgattattcaacacgtacggttatttcacctgatcctaatttgcgtatagacgag
gtcgctataccttatccggtggcaatgactttaacatatccgcaaaaggtttgtcgagct
aacataagatttctaaagaaattaattttaaatggagctgataagcatccaggagctaat
tttgtcatggaagaaaaaacgaagctaagaaagtatttgaagtacggaaatcgtggaaaa
attgcaaaagatttgaaggctaaaattatgcctaatcgcacatttcgattcaacgaatgc
gtctgtacaccatttaatgcggattttgatggcgatgagatgaatatccatttacctcaa
acagaagaagcgagggctgaagcactcgtacttatgcagagtaaatcgaacatggttact
cctagaagcggagagcctctaatagccgctattcaagattttataacaggtgcttaccta
cttacccaaaaggatgtattccttgaccgagcaaaggtatcccaattttgctccagtatg
ctagattctcgtactgcaagtactgagatagatttaccggtcccatctatcatcaagccc
gttcaattgtggactggtaaacaggttattagtgctttactatcaccgcttgacgtggta
tttgctttctgtgtgttattagatgtagtatttcataatggtgaacacatttgcggagtg
cttgataagagtactttgggctccggctctcgaagtaatcgcggattttctatcggaatt
agtgatgtaacgccagaaattaatgttattaatggtaaaagagagctagtaaagaatggg
tatgataaatgtgatcagcatattcaagattttaaagatggtagactccataatcaacct
ggatttacagcagacgaaactctagaagcagttattttaagagaactatcggttattaga
gaagatgcaggtaagatatgcttgaaagaattacatccttcaaatgctcctttaactatg
gctctgtgtggttcgaagggttcaaacatcaatatatcacagatgataagttgtgtcggc
caacaagccgttagtggacgcagaatcccgaacggatttgagaatcgtgctctaccttac
tttgatagagattccaaagttccagctgcaaaaggcttcgttgaaaatagtttttattcc
ggactagagcctactgaatttttttttcatactatggctggacgtgaaggtttagtggat
acggctgtcaaaacggcagaaacaggatatttacagagacgactaataaagtcactggaa
gacttagctatccgatatgataccacagtgcgtaactcggtgggtggaattgtacagttt
aagtatgggcatgatggtctcgatccgagtttaatggaaagcaaagatcagcctatagat
tataatcatttactttatcatataaaggctgtatcatactttcttaggaactatattaat
cgtatagcatcaaaacaacctcaaaatcgaaaatatgggcctcatacaccgattctagat
catcatataactgaaatccaattaaagcaatttatacagtcttgtggtaacaaatatgtg
agagctaaaattgaacccgggaccgctgttggcgcgattgccgcacaaagcataggcgaa
cctggaacgcaaatgactttgaaaacatttcactttgctggtgttgctgccatgaatatc
ctttga
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