Trichoplax adhaerens (placozoan): TRIADDRAFT_56476
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Entry
TRIADDRAFT_56476 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TRIADDRAFT_56476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tad03019
]
TRIADDRAFT_56476
03036 Chromosome and associated proteins [BR:
tad03036
]
TRIADDRAFT_56476
Messenger RNA biogenesis [BR:
tad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TRIADDRAFT_56476
Chromosome and associated proteins [BR:
tad03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
TRIADDRAFT_56476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
6754099
NCBI-ProteinID:
XP_002112447
JGI:
56476
UniProt:
B3RY89
LinkDB
All DBs
AA seq
1813 aa
AA seq
DB search
MFGSTNASTPFGGNQSGFTATSGGLFGQSSTNTFGSGSTGFGTSTTSGFGNTGGGFGTQS
KSLFGNTATTSASGGLFGTSGNQVNPSTSFGGSGFGGFGNMTNTSNSGSNFFSNTNTNTS
QSSNLFGNNTNNTFGGFGNMSQAQTGSTIKYNPPSATDTVTRNGRTENVSARIQCISAMN
EYIKKSPEELRYEDYMQNRKGPSSGSFTGGGIKNFGNTSTSTSGFGGSSGFGQGTTSVFG
QTPTSSVNTGSLFGQSQQTGFGQNAKNNFFNNTSTSTSNAFGGVSQSQGFGQNSSLSFGQ
SNQQKPLFGNLSSSNPASFGANTSTFGQSQSFGQSFGQPNTSTNLFGNNNKPTFGQTSTA
PTSFSSGFGFPSNNTTNTTSSAPSTGLFGTNTFGTSSTNTGFNASNSLFGNKGGFGTGFG
NTSNSAFSSTANKGSLPNSSQSFNLKPGSNTSFGTGGTNFNLGFGSAQPQLQLIAGNSMI
GLNNPHSAGINNNAMMLQGQIKAMINSPYGDTPLFRNAVRDSRHDYTNSIVSTESVLNNS
SYAYSKYRVSSRLGGKIRLSRPKKFDQLSDDLNDELPSEVTLKAKKNWKKLTLVDTPDKK
DNKNNSETKSTTAVNYLEWEKGYSYARFGSDSHDNRSETSIPSQPPESSPKILVNNCNTG
DDVNDVFPSEADNTSASLVLPQSKLDENSIITKPMPVRPKDPQVFASTPAVEQFLNKGPD
QDLSNFTPEGNDATPKTHISEATLVHLSKEGYYTVPHIDEINEIARTKERVILPTFTVGR
EGFGSVYYDTPTDVTGLDLDDIGISRIDLVEFRFQEVSIYPDESLKPPNGTRLNKPAIVT
LLAVWPGDKKNRDPIIDPKRLQLMGYAKRLRRITSRMGATFIDYKPDNGAWQFRVEHFSK
YGLKTDEDEDSSPSQNSNTQKTQHLKTQKLLEAEHRKLWSTADTDEDSPMEINDDEAMSD
SEELNSNNDLDSIDSQSTRNQDEDAVYSNLTLDTRRIQVMKASFFRENVEENKDDYKGQP
VSGKRIKSSATDNVDLLRIKRFHKAVSSKSTTMPISGSNELVLTPRKSMIRVGNNATNLL
GVSSVEKSATLDEGNNRTNIASTVLSRSRIEAAQEFDQDNAEKRLLLLPVNQPKLISHNE
SVAHGKGHCVIDAALFHGRSFRVGWGPNWMFASINYCSQSGKDSSEVRESQRMSVGAKVP
NFSENSSFSVNIKKFEDEKPKVAVDRLDIEFNHSICNLEHGCLPLFSPSRGKDVAHEYAR
QSATVVAQGAEDKQLQHASQVWDLVVALWGFPSKATPDGNESSSDESDTEMEAKNLNSYE
EQNERRHALSNWFRRSVINSNSTKATANSPNTSMIFDHLTTKSINEACNICHEIGDYRLA
LLISQLSGSRNVTALVSRQLDDWYKNKADQFIDHNRLKIYALLAGKKLWETSNKIRICPC
EDLNWKKAMALHMWYILPTTKSIRDVISNYKAAYQGGNGYEKYANPPLPFYMQEKLKTDD
NHKSIEDLCYHLLCLYCDRSHKLQQMLASNTFTPFQLDCSLSWHLYQCLVSLEYHHLSAK
FVANLHTNYAAQLESCGNWHWAVFVMLFLKDDQRRERAVRDLLNRHCKLTTVDVAKEKFI
EDKLLIPPAWIHEAKALRAKYNGLLKEEAFHLLKAKQWQAAHNVIINDLAADCILEGDTK
YLRKILEEIQAEGADGYIENWINGGQLYLDYILLKETVNTLNLQKNVQQLLRDCSEIQLK
LNSLKPENNKRKACKFFMSSHVLNIINKYSIRQLRINELKAEVTAPPLVKEGNFCCDSDI
AYFRNIMKSVVSN
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atgttcggatcaacaaatgcaagtactccctttggcggtaatcaaagcggatttactgct
acctctggtggtctatttggtcagtcaagtactaatacatttggctctggtagcactggt
tttggtacttctacaacaagtggctttggcaatactggtggtggatttggcacacaatcg
aagtcgttgtttggtaatacggctactacgagtgcaagtggaggactgtttggtacatct
ggtaatcaagtaaatcctagtaccagtttcggtggtagtggatttggtggatttggtaac
atgacgaatactagcaactccggtagcaatttcttctcaaatactaatacaaatacatca
caatctagcaatttatttggaaacaatacgaataatacatttggaggattcggtaatatg
tctcaggctcaaacaggatccacaatcaaatataatcctccatctgctacggatacagtt
acacgaaatggacgtactgaaaatgtatctgcaagaatccaatgtatttctgctatgaat
gaatacatcaaaaaaagcccagaggaattgagatacgaagattacatgcaaaatcgtaag
ggtccatcatcaggatcctttactggtggaggcatcaaaaattttggaaatacaagcact
agcactagcggtttcggaggtagttcaggctttggtcaaggcactactagtgtttttggc
cagacaccaactagttcggtcaacactggatcccttttcgggcaatcacaacaaactgga
ttcggtcaaaatgccaaaaataatttttttaacaacacatcaacgtctacgtctaacgct
ttcggcggtgttagtcaatcacaaggtttcggacagaattcatcactctcttttggtcag
tcaaatcagcaaaagcccctatttggaaatttatcgtctagcaatcctgccagtttcgga
gccaatacttctaccttcggtcaaagtcaatcttttggtcaaagcttcggtcaaccgaat
acaagcactaacttatttggaaataataataaacctacttttgggcaaaccagtactgct
cctaccagcttctcttctggctttggatttccttctaataatactactaatactaccagt
tctgcgccttcgactgggctttttggaacaaacacgtttggaacatctagcaccaacaca
ggattcaatgctagtaattcgcttttcggaaataagggtggattcgggacaggttttgga
aacaccagcaattctgctttttcaagcacggccaataaaggctctctgcctaattcaagt
caatcgtttaaccttaaacctggatcaaatacttcctttggaacaggaggtactaatttt
aaccttggctttggtagtgcgcagccacaacttcaactcatcgctggtaactcgatgatt
ggtcttaacaatcctcattctgctggaatcaacaataacgcaatgatgttgcaaggtcaa
atcaaggcaatgataaattcgccctacggtgatacaccgttatttcgcaatgccgttagg
gattcccgccatgactataccaacagcattgtttctacagaatctgttcttaataattct
agttatgcatacagcaaatacagggtatcttcacgattaggagggaagatcagacttagc
cgaccaaaaaaatttgatcagctatctgacgatctcaacgatgaattaccgtctgaggtt
actttaaaagctaagaaaaattggaaaaaattaactcttgttgacactcccgataagaag
gataacaagaacaattcagaaactaaaagtaccactgcagtaaattacttggagtgggaa
aagggttatagttatgcacgatttggatcagattcgcatgataaccgttcagaaacttcc
attccgtctcaacctccagaaagtagcccgaaaattttagtcaacaactgcaacactggt
gacgacgttaatgacgtatttccttctgaggcagataacactagtgcatctttagtatta
ccacaatcaaagttggatgaaaacagtatcattactaaaccaatgcctgttagaccaaag
gaccctcaagttttcgcgtctactccggctgttgaacaattcctaaataagggacctgat
caggatctatccaattttactcctgaagggaatgatgctactcctaaaacgcatatttcg
gaagctaccttggttcatttatctaaagaaggatattacacagtacctcatatagatgag
attaatgaaattgcaaggactaaggaacgagttatattgcctaccttcaccgtaggacgc
gaaggttttggaagtgtatactacgatactccaacagatgttactggtttggatctggat
gatatcggtatttctagaatcgatttagttgaattccgctttcaagaagtttctatctat
ccggatgaaagtttaaaacctccaaacggcactcgccttaataagccagcaattgtaaca
ctgctagcggtttggccaggagataagaaaaatcgtgatcctataatagatccgaaaagg
ctacaattaatgggatacgctaagaggttacgtaggataacatcaagaatgggagcaaca
tttatcgattacaagcctgataatggagcttggcagttccgggttgaacatttttcgaag
tatggtctcaaaacggacgaagatgaagattcttctccttcacaaaactcaaatacgcag
aagacacagcatctaaaaacacaaaaactcttggaagcggagcatcggaagttatggtcc
acagctgacaccgatgaagacagccctatggaaattaacgatgatgaagctatgtcagat
agtgaagaattgaattctaataatgatctcgatagcattgacagccaaagtacacgaaat
caggacgaagacgctgtttactcaaatttaacgctagataccagacgtatacaagtaatg
aaagcttcttttttccgcgaaaacgtagaggagaataaagatgattataaaggacaaccg
gtttctggcaagcgtatcaaatcttcagctaccgataacgttgacttacttcgtattaag
cgctttcataaagcagtctcttcaaaatccactactatgccaattagtggatcaaatgaa
ttagtgctgacgcctagaaaatctatgattagagttggtaacaatgcaaccaatcttctt
ggtgtatcgtctgtagaaaaatctgcaaccttagatgaaggcaataaccgaaccaatatt
gcctcaacagtgctttctcggtcaagaattgaagctgctcaagaatttgatcaagataac
gccgagaaacgattattattgcttccagttaatcaaccaaagttaatttcacataatgaa
tcagttgctcacggaaagggccattgcgttattgatgctgctttattccacggacgttct
tttcgtgttggatggggtccgaattggatgtttgcatccattaattactgttcacaatct
ggcaaagacagcagtgaagtccgtgagagccagcgtatgtcggtcggagcaaaagtccca
aactttagtgaaaattcttcgttttccgtaaatattaagaaatttgaagacgaaaaacca
aaagttgccgttgatcgcttagatattgaatttaatcatagtatttgcaatttggaacat
ggctgtcttccgttgttttcgccatcccgaggtaaagatgtggcgcatgaatatgcccgt
caatctgccacggttgttgcacaaggtgcagaagataagcagttacaacacgcgtctcaa
gtatgggacttagtagttgccttatggggattcccctcgaaagccacccctgatgggaat
gaatccagcagtgatgaaagtgatactgagatggaagcaaagaatttgaattcgtacgaa
gaacaaaatgaaagaagacatgctctttccaattggtttaggcgttcagttattaattca
aatagtaccaaagctactgctaattcacctaataccagtatgatcttcgatcacttaact
acaaaatccatcaatgaagcatgtaatatctgtcatgaaattggagattatcgtcttgct
ttactgatttcgcaattgtctggttcaagaaacgttactgcacttgtgtctcgacagtta
gacgactggtataaaaataaggccgatcaatttatcgaccataatagattaaagatctac
gccttacttgctggtaaaaagctatgggagacgtcgaataaaataagaatatgtccgtgt
gaggatctaaattggaagaaggctatggctctacatatgtggtacatacttccaaccacc
aaatctattagagacgttatctcaaattataaagccgcttatcaaggagggaatggctat
gaaaaatacgcgaatcctccattaccattttacatgcaagaaaagttaaagacagatgac
aatcacaaatccattgaggacctgtgctatcatctattatgtttgtattgtgacaggtct
cataaacttcagcaaatgcttgccagcaatacatttactcctttccagttagattgcagc
cttagttggcacttatatcagtgtttggtatcgttggaatatcatcatctatcagctaaa
tttgtggccaatctgcatacgaattatgcagcgcagctagaatcgtgtggaaactggcat
tgggcagtatttgtaatgttatttctaaaagatgatcaaagacgagaaagagctgtccgc
gacctactgaacaggcattgtaaattaaccaccgtcgatgttgcaaaagagaaatttatc
gaagacaagttgttaataccgccagcttggatccatgaagcgaaagcacttcgtgctaag
tataatggacttctaaaggaagaggcttttcatttgctaaaggcgaagcagtggcaagca
gcccataatgtcattataaatgacttagctgcagattgtattctggaaggtgacacaaag
tatctacgtaaaatcttggaagaaatccaagcagagggtgctgacggttatattgaaaac
tggattaatggaggacaattatatttagattatattttactaaaagaaactgttaataca
ctcaatcttcagaaaaatgtacagcagctgttacgagattgttcggagatacaattgaaa
ttaaattcgcttaaacccgaaaataacaaacgaaaagcatgcaaattttttatgtccagt
cacgttctaaatattatcaataaatactccatacgccagctacgtattaatgaattaaag
gcagaagttacagcacctccattagtcaaggaaggtaatttctgttgcgactctgacata
gcttatttcagaaatatcatgaaatctgttgtaagcaactag
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integrated database retrieval system