Trichoplax adhaerens (placozoan): TRIADDRAFT_56718
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Entry
TRIADDRAFT_56718 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TRIADDRAFT_56718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tad03400
]
TRIADDRAFT_56718
DNA repair and recombination proteins [BR:
tad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
TRIADDRAFT_56718
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
DUF5053
Motif
Other DBs
NCBI-GeneID:
6753779
NCBI-ProteinID:
XP_002113012
JGI:
56718
UniProt:
B3RWE3
LinkDB
All DBs
AA seq
934 aa
AA seq
DB search
MASSSTQQLTLDGTNQNGFRRFLDSLPEKLETTIRIFDRSDWFTVHGSDAIFVANNIFRS
KSVIRYYRNGNEKLEYVVLNNANYEKVLRDLLLVRQYRIELYKNKGTKTNQQWYLAEKAT
PGNLRCFEEIIFGNNEMSESAPVIAIRLVVENGQRIIGVAYADATLYNLGISQFEDNDLM
TNLEALMVQIGPKECILVSGETSVDAVKLRQVINKTGVLVTERKKSDFNDKDIVQDLNRL
LRIKSGNAATLAEIDQQVAMSCVTALIKYLELLSNVSNFNQFDLVTFDLSQFMKLDSAAV
RALNLFPSPSDAGNKLRCLMGVLNYCKTAPGQRLLAQWLKQPLMDIAKIEERLNLVDVFV
DDTELRQSVQEDHLKRFPDLQRLAKKFQRSRANLQDCVRVYQSINRVNCLIKALVGYDSA
YKDLIRNMYSNPLSDLTTDFQKYQELIETTVDLDSVANHEFVIKPSIDPDLQEYRNQMDD
LIEQISRLLSLAARDLGLEANKSIKLESNSQFGYYFRVTLKEEKALRSNKRFMMIDTNKH
GVRFTNNNLESLNKSLQEIKSMYDGKQEDFAVEVINIASGYYEPLQSLSRIIAHLDVIVS
FAHASTNAPVPYVRPTILDTSDRIIELTEARHPCLEMQDDVAFIPNDVKFAKDDAEFIII
TGPNMGGKSTYIRQIGVIVLMAQIGCFVPCSFARISIIDCILARVGAGDSQLKGVSTFMS
EMLETSYILKTATEKSLIIIDELGRGTSTYDGFGLAWAISESIAKDIGAFTLFATHFHEL
TALANDIKSVKNFHVSAMTTEEALTLLYRVKPGVCDQSFGIHVAELAHFPENVVTHAKER
AADLENCQAISYVTESDSDRRRDIMEEGEGLIHDFLQKISQISTTERSPQEVYSEIAMLR
NSLSSCSNSYIKDLLIITYICGRFRSMIACKRLM
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatcatcaactcaacaactaactctagatggtacaaatcaaaatggatttcga
cgatttctggattctttaccagagaaactggaaacgactatccgaatctttgatcgatcg
gattggttcactgtccatggatccgacgctatttttgttgcaaacaacatctttcgatca
aaaagtgtaattcgatattatcgaaatggcaatgaaaagttagaatatgtagtcctaaat
aatgcaaattacgaaaaggtgttacgagatttgctgcttgttcgacaatatcgcattgaa
ctctacaagaacaagggtacaaagacaaatcagcaatggtacctcgccgaaaaggcaaca
cctggcaatttgcgatgctttgaagaaatcatttttggaaataatgaaatgtctgaatca
gccccagtcatagccatacgactagtagtggaaaatggccaaaggatcattggtgtagca
tacgctgatgctaccctctataacctcggcatttcacaatttgaagataacgatttaatg
actaatctcgaggcattaatggtgcaaatcggccccaaagaatgtattttagtatcagga
gaaaccagcgtagatgctgttaaacttcgtcaagtaattaataagactggcgtattggta
actgaaagaaagaaatcggactttaacgacaaggatattgtacaagacttgaatcggtta
ctgaggataaaatctggtaacgccgcaacattagctgaaatcgatcaacaagttgcaatg
agttgtgttacagctcttataaaatatctagaacttttgagtaacgtgtcgaactttaat
caatttgacttggtaacattcgatttaagccaattcatgaagcttgattcagcagctgtt
cgagcccttaatttatttccaagcccttcggatgctggtaataaattgcgttgtttgatg
ggtgtcctaaattattgtaaaacagctcctggacaacgattactagctcaatggcttaaa
cagccgttaatggacattgccaaaatcgaggaaagattaaatttggttgatgtattcgtt
gacgatacggaattgagacagtcagttcaagaggatcaccttaaaagattccccgatttg
cagcgtcttgctaaaaagtttcagcgtagccgagcgaatttacaagattgtgttcgtgtc
tatcaaagcattaatagagtgaattgtctcatcaaagcattagtaggctatgatagtgcc
tacaaagatcttattcgaaatatgtatagcaacccattaagtgatttaacgacagatttt
caaaaatatcaagaattaattgagaccacagttgatcttgattctgttgcgaaccatgaa
tttgttattaaaccctcaatcgacccggacctacaagaatatcgcaatcaaatggatgac
ctgattgaacagatttcacgccttttaagtttggctgctcgtgatttaggtcttgaagct
aacaagtctattaaacttgaatccaacagccaattcggctattattttagagtaacttta
aaggaagagaaagcgctacgaagcaataagcgatttatgatgatcgataccaataagcat
ggagtccgatttactaataataatctggagtctttaaataaaagtttgcaagagataaaa
tcgatgtatgacggaaaacaagaagactttgccgttgaagttatcaatattgcaagcggc
tactatgaacctttgcaatcattaagccggattattgctcatttggatgttattgttagt
ttcgcccatgcatcaactaatgctcctgtcccatacgtgagaccaactatcttggataca
agtgatcgaataattgaactgactgaggctagacatccgtgccttgaaatgcaagacgat
gtagcatttattcccaatgatgtcaaatttgctaaagacgatgcagaatttattattatc
actggcccaaacatgggtggcaaatctacttatatacgtcaaatcggtgtaatagtcctt
atggcacagattggttgctttgttccttgttcttttgctcgaatctccatcatcgattgc
attttagctcgcgttggtgctggtgacagtcagttaaagggtgtttctacctttatgtcg
gaaatgttggaaacttcatatatcttaaagactgctacagaaaagtctttaattattatt
gatgaactcggtcgtggtacttccacttacgatggatttggattagcatgggccatttct
gaatctatagcaaaagatattggtgcctttactctatttgccacacatttccacgaattg
acggcattagcaaatgatatcaaatctgttaagaactttcacgtttctgctatgacgaca
gaagaagctttaacacttttatatagggttaagccaggcgtttgcgatcaaagttttgga
attcatgtagctgaacttgctcattttccggaaaatgttgttacgcacgctaaggaaagg
gctgcggatttggaaaattgccaggccataagttatgttaccgaatcggatagcgatcga
cgtcgtgatattatggaagaaggtgaaggcctaatacacgactttttgcagaagataagt
caaatttctacaacagaaagatcgccacaagaagtctacagcgaaattgcgatgctgaga
aattctttgtcttcttgtagtaactcctatatcaaagatctgctaattataacctacatt
tgcggacgtttccgatctatgattgcttgcaaacgtttaatgtaa
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