Trichoplax adhaerens (placozoan): TRIADDRAFT_56859
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Entry
TRIADDRAFT_56859 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
tad
Trichoplax adhaerens (placozoan)
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tad03021
]
TRIADDRAFT_56859
Transcription machinery [BR:
tad03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
TRIADDRAFT_56859
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
6754280
NCBI-ProteinID:
XP_002112642
JGI:
56859
UniProt:
B3RWS4
LinkDB
All DBs
AA seq
640 aa
AA seq
DB search
MPRCAICDSQSFEVVDGYHYCDLCGTQSQAVFESATGDEGATVLLGRAVSRSRRSLGGMP
RKVVDKGVIWYTSEGFTFVIKAQVEQLIKLGADPKLQHVVRQLWFGYLKKIGIAFQESTS
KAQQETIRELYCRTNRDVIQVTKDNPIPLKTRKRKRKPAKLDVIDSAFLNSQLTSDDFYP
EDDPFNEPTAGSPDKSYISSDSDDDNQNDPQISMPDPSIISGSVSDLFMSGSMPKGKLAM
ILQMKQCYTIVFCCLGLRWINELILPSDVINWIEDGAVSYLDVSDILPASMKFSSSDHLT
FCKQYLPSTTLIENYMKDLARALELPPFPIPDLQLLTGRFILDLQLPPVFHRLVNIIISK
CDIFKTNKSSNMVTITFCISTAAMAIVILVVKSIYVLDDNQEHLLAKYSESVADNGNLSD
SVWVWEEWINFIEARIFSNATASLPWSLDSLKYFKDWDRYIAYCREKVFGSWKPRVAYNR
DRKIINAENIEALLSDSSRHSDDEHLDLDSRKYRSKLSTFPVSGGSNDQNAFKPVRHIPL
SKLDVLLSSENEDGFWNYYVQYCSFDEIYKVRPFKNYKKDVVIDQNDAMTFHKSYNLLLN
ICSRIIKVTPLDLHRRVAYFERYLFSLSGRRCLLTGVEVP
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggtgtgcgatatgtgatagccaatcattcgaggtagtcgacggatatcactac
tgtgacctatgtggaacacaatctcaggctgtttttgaatcagctactggtgatgaaggc
gctacagtacttcttggacgagcagtaagtcgaagtagaagatctctgggtggtatgcca
agaaaagttgtagataaaggtgtgatatggtatactagcgaaggcttcacttttgttatc
aaagcacaagttgaacaacttattaagttaggtgctgatccaaagttacaacatgtcgta
cgacagctatggtttggatacttgaaaaaaattggaattgcattccaagaatcgacctca
aaggctcaacaagaaacgattcgtgaattatattgcagaacgaatcgagatgtcattcaa
gttaccaaagacaatcctattccgttaaaaactcgaaaaagaaaacgcaaacctgctaaa
ctcgatgtaattgattcagcttttctgaattctcaactaacttcggacgatttctatccg
gaagatgatccatttaacgaaccaacagcgggtagtccagataaatcgtatatcagtagt
gattctgatgatgataaccaaaatgatccacaaattagcatgcccgatccgtccattatt
tctggatcagtcagtgatttatttatgtcaggaagtatgcctaaaggtaaacttgcaatg
attttgcagatgaagcagtgctatactattgtgttttgctgcttaggcttgcgttggata
aatgagctaatattgccgagtgacgttattaattggatagaagacggagctgtctcttat
ctcgatgtatctgatattctaccagcatctatgaaattttcctcttccgatcacttaaca
ttttgtaaacagtatttaccttcgaccactctgattgaaaattacatgaaggaccttgct
cgtgctcttgagttacctccgtttcctattcctgatttacaattgctgactggaagattt
atattagatttgcagttacctccagtctttcatcgtttagtgaacatcattatatccaag
tgtgatatctttaaaacaaataaaagtagcaacatggttaccattaccttttgcatcagc
actgcagccatggcgattgtaattcttgtagtaaaatcaatttatgtattggatgataat
caagagcatttattagctaaatacagtgagagcgtggctgacaatggtaatctcagcgat
agtgtttgggtgtgggaagaatggatcaattttattgaagctagaattttcagtaatgct
acagctagtttaccctggtcattagatagtttaaaatatttcaaggattgggatcgctac
attgcatattgtcgagaaaaggttttcggtagttggaaaccaagagtggcctataaccgt
gacagaaagatcattaatgctgaaaatattgaagctttattatcggattcttcccgacac
tcagacgacgaacatcttgatttagattctaggaaatatcgatcaaaactatccactttt
cctgtatcaggtggttctaatgatcaaaatgcatttaagccagttcgacacataccgctg
tcgaaacttgatgttttgctttcgtcagagaatgaggacggattttggaattattacgtt
caatattgtagttttgatgagatttataaagttcgcccctttaagaattataaaaaggat
gtagttattgaccaaaatgatgcgatgacatttcataagtcctataatcttttattaaat
atttgttctaggataattaaagttactcctttagatttgcaccgcagagtcgcttatttc
gagcgatatttattttcgttatctggaagaaggtgtttacttactggtgtcgaagtacca
tga
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