Trichoplax adhaerens (placozoan): TRIADDRAFT_56890
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Entry
TRIADDRAFT_56890 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
tad
Trichoplax adhaerens (placozoan)
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tad01009
]
TRIADDRAFT_56890
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tad03019
]
TRIADDRAFT_56890
04131 Membrane trafficking [BR:
tad04131
]
TRIADDRAFT_56890
03036 Chromosome and associated proteins [BR:
tad03036
]
TRIADDRAFT_56890
Enzymes [BR:
tad01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
TRIADDRAFT_56890
Protein phosphatases and associated proteins [BR:
tad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
TRIADDRAFT_56890
Messenger RNA biogenesis [BR:
tad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
TRIADDRAFT_56890
Membrane trafficking [BR:
tad04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
TRIADDRAFT_56890
Chromosome and associated proteins [BR:
tad03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
TRIADDRAFT_56890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Coilin_N
Motif
Other DBs
NCBI-GeneID:
6754298
NCBI-ProteinID:
XP_002112654
JGI:
56890
UniProt:
B3RWV4
LinkDB
All DBs
AA seq
432 aa
AA seq
DB search
MSAEEIINQLQNLTVEDSKFDLADGHGFSTCYVYDKDMKKHQNLYDRSHPEVPDRISRIY
DKCQEYELLKKCKRLPSRVATDEELLIMHSQNLIDTLRATQTMKSRDLSKYADSLDSIYL
HPSSFECAKLAAGCTLAVIEEVASGKSLNGIGIVRPPGHHGFHDICSGFCLFNNVAIAAK
KVQSYPNIDRILIVDWDVHHGNGTQSLFYKDPSVLYYSIHRYDHAEFYPFMEDANYDRAG
EEAGEGFNINVAWNKFNPDLVIVSAGFDSARGDPKGLCNVTPEGFAHLTKLLMNLANGRL
ALILEGGYNLTSNAESMAACLRVLLGESCPPLEEAAIPCQSALESISNTLKTHSKYWKSL
RLPAFTTDDTQKRESETEKMKPAEKRPTTSSDTQKRESETEKMKPVEKRPTTSSKKKNKA
RVQHKEATDEPT
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgaagaaattatcaatcaactgcaaaatttgactgtagaagatagcaaattc
gaccttgcagatggccacggatttagtacgtgttatgtctacgataaagatatgaagaaa
catcaaaatctttatgatagaagccatccagaagtgccagatagaatatctcgtatttac
gataaatgtcaagaatatgaattattaaaaaagtgtaaacgattaccgtctagggtagcg
actgatgaggaactcttaataatgcatagtcaaaatctaattgatacattaagagccact
cagactatgaaaagtagagatctttccaaatacgccgattctttagattctatatactta
catccgagctcttttgaatgcgctaaattggctgcaggatgtacgttagcagtcatagag
gaagtagctagtggaaaatcattgaatggaataggaattgtgcggcctccagggcaccac
ggatttcatgatatttgctctggtttctgtctctttaacaatgtagcaattgctgctaaa
aaagttcaatcttatccaaatattgatagaattctaattgttgattgggatgtacatcac
ggaaatggcacacaatcattattttataaagatcctagcgtcctttactattccattcat
cgctacgatcacgctgaattttatcctttcatggaagatgcaaattatgatagagctggg
gaggaggcaggcgaaggatttaatattaatgttgcatggaataagttcaatccagatcta
gttattgtatcggctggatttgattcggcacgaggagatcccaagggcctatgtaatgtc
actccggaagggttcgcacatttaacgaaactattgatgaatcttgccaatggtcgcttg
gcattaatactagagggtggatacaatctcacttctaatgcagaatcaatggctgcgtgt
ttacgagtactacttggagagtcatgcccgccgttagaagaggctgctattccatgccaa
agtgccctcgaatcgatcagtaatacgctaaagactcactccaaatactggaagtcactg
agattaccagctttcacgactgacgatactcaaaaacgagaaagcgagactgaaaaaatg
aaaccagcagaaaaaagaccaacgactagttcagacactcaaaaacgagaaagcgagact
gaaaaaatgaaaccagtagaaaaaagaccaacgactagttcaaaaaaaaagaacaaagct
cgtgtgcaacacaaggaagcgactgatgaaccaacgtaa
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