Trichoplax adhaerens (placozoan): TRIADDRAFT_59146
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Entry
TRIADDRAFT_59146 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K13175
THO complex subunit 6
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TRIADDRAFT_59146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tad03019
]
TRIADDRAFT_59146
03041 Spliceosome [BR:
tad03041
]
TRIADDRAFT_59146
Messenger RNA biogenesis [BR:
tad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
TRIADDRAFT_59146
Spliceosome [BR:
tad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
TRIADDRAFT_59146
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
WD40_Prp19
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_DCAF4
EIF3I
Beta-prop_WDR90_POC16_2nd
PQQ
Beta-prop_TEP1_C
PQQ_3
Beta-prop_WDR75_1st
WD40_RFWD3
DUF5780
Beta-prop_SCAP
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
6756254
NCBI-ProteinID:
XP_002115204
JGI:
59146
UniProt:
B3S4N0
LinkDB
All DBs
AA seq
293 aa
AA seq
DB search
MDMYGVVYSLCYSPCGKLLAAGDNFGRIFIFQYVDALANYICIFFCIGVVHSGPIYALTS
TSTYLVCGILDRIVGYKWSEILDKENILYCGCGDGRIYGYDLKSGHNKCSMVGHEDSIHS
IVLDPQSKACISSSEDGSVRFWDNRKPSQIAIIEPYKHQQLSHHGGGKWISAMATDTDGN
WMACGGATGLSIWHLQSRTLTSSCNDITACVRDVVFYDGNFITVGDNHHVTHTTINGEVT
ATIPTSSSPNFAIQINENLNSKPVLCTAGNSIMIDIFINFFYKTTSFQCTCSY
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggatatgtatggcgtagtatattcgctatgttactctccatgtggaaaattactagct
gcaggcgacaactttggtcgaatctttatatttcaatatgtagatgctttggctaattac
atatgcatatttttttgtatcggtgtagtgcattctggacccatttatgctttaacgtca
acttcaacatatcttgtttgtggtatattagatagaattgttggctataaatggagcgag
attcttgataaggaaaatatcctatattgtggttgcggagatgggagaatttatggttac
gatttgaaaagtggacacaataagtgcagcatggttggtcatgaggacagcatacatagc
atagtcttagatccccaatcgaaggcgtgtattagctcctctgaagatggatcagtacga
ttttgggataatcgtaagccctctcaaattgctataattgaaccttacaaacatcagcaa
ctaagccatcatggaggtggcaaatggatttctgctatggcaaccgatactgatggtaac
tggatggcatgtggtggagctactggtctatctatttggcacctgcagtctagaactctt
acatcgagctgcaatgatataaccgcttgtgttcgtgacgtagtcttttacgatggaaat
ttcattacagtaggggataaccaccacgtaacacatactactattaatggtgaagttacc
gcaactattcctacttcgtcatctccaaatttcgcaatccaaataaatgagaatcttaat
agtaaaccggtgctatgtacagctggaaattccatcatgatcgatatcttcatcaatttc
ttttataaaactacctctttccagtgtacatgctcgtactaa
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