Trichoplax adhaerens (placozoan): TRIADDRAFT_61902
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Entry
TRIADDRAFT_61902 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad04140
Autophagy - animal
tad04142
Lysosome biogenesis
tad04145
Phagocytosis
tad04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
TRIADDRAFT_61902
04142 Lysosome biogenesis
TRIADDRAFT_61902
04140 Autophagy - animal
TRIADDRAFT_61902
04148 Efferocytosis
TRIADDRAFT_61902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tad04131
]
TRIADDRAFT_61902
Membrane trafficking [BR:
tad04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
TRIADDRAFT_61902
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
VPS18_solenoid_2nd
TPR_PEP5_VPS11
DUF7017
Beta-prop_RIC1_2nd
Motif
Other DBs
NCBI-GeneID:
6759097
NCBI-ProteinID:
XP_002117865
JGI:
61902
UniProt:
B3SCA5
LinkDB
All DBs
AA seq
851 aa
AA seq
DB search
MPHTAFEKVSVVEKLPSKLIIESICTYGDYLLVGTRDGVLISYNITMGPDQSSPDIKLVR
TLKNFSKKPIVQMAAIESINLLISLSDSTICLYELKSLTLINQMAKTRGATLFAVDVSKN
REDGDQIRLCVAVKKKLQIYVWEDVNFVELGPDLSVPDTPRAVMWSKNYLWLGFKRSYYV
IKLDNNDMFELFEIGKSPEPMITALRNGIVAVQKDDMTVFLNSDGKPARSFTITWSDTPA
NITYTAPYIMGILSRYLEIRLVDPPTLVQSIEFDKAKLITCDKYCYLASQSCVWRVQPVR
LVDQLETLINVKEFELALNLLNVNSIDGAQKEQQTRRIKILLAFDLFAKHYFQRAFKYFT
ELNLDVRIIIGLFPGLMGEEPLTNFKYPIEITRLPSTAEQNGLTFLAEYLTDARNNYIKE
KKNSNPNDIEEGKKRDSLLQVIDTTLLKCYIKTGNGVVKSLLRLKDNNCHIDTSVKVLKE
TNSLEELVILYESKGLHERALELLKSEAKRSDSPLSGYDKIISYLQKLGEQNLKLIFKFS
AWVLKTSPDSGLMIFIDENTPEVESLPRGKVYKHLQNYCPELCIPYLEHIIHTWKEEESE
FHNDLIKLYLQEVENETVKNSNGLFEERALLLGRLGRHDQALAIYVHVVKDDKMAEEYCW
RHYNSEGSGHNEVYHHFLRMYLSPPDPKGLGIKVDIPKLEPNVKRALEILEKYYDRINTA
EALVLLPPTMKVNEIASFLMNVVEDRTSRRRNGLILKSLLYSQRLQVQELRMQYRKNSSN
ISEDKSCRVCGQRIGVSAFARYPNGVVVHYGCCTDLKSMQFYRAWCKIKYKVFSFDPELL
ETLKVFSFTIN
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatacagcgtttgaaaaggtgtctgtagtggagaaactaccatccaagctaatt
atcgaatctatttgcacctacggggattacttactggtaggaacaagagatggtgtctta
atatcctacaatattaccatgggcccagatcaatctagcccggatatcaaacttgtacga
acattaaagaatttctctaagaaaccaatcgtacagatggcagctattgaaagtataaac
ctactcattagtttatcagattccaccatttgcttgtatgaattaaaatccttgacgtta
attaatcaaatggccaaaacaagaggagcaactctgtttgctgttgatgtttcaaaaaac
cgagaggatggagatcaaattcgtctatgtgttgccgtcaagaaaaaattacagatttac
gtttgggaagatgtcaattttgtcgagttaggccctgatttatctgtgccagatacacct
agggctgtcatgtggtctaaaaattacctttggttaggttttaaaaggtcttattacgtt
atcaagttggataataacgacatgtttgaattattcgaaattggaaaatctccagagcct
atgataactgcgttgagaaacggtatagtagctgtccaaaaagatgatatgactgtattt
ttaaattctgatggcaaaccggcaagaagtttcacgataacatggagtgatacaccagcc
aatataacttacactgcgccctatattatgggaatattatcaaggtatttagaaattcga
cttgttgatcctccaacattggtgcaaagtatcgaattcgacaaagccaaattgataact
tgcgacaaatactgctatttagcttcacaaagttgtgtatggcgtgtacaaccagtacga
ctagttgatcaattggaaactttaatcaatgtaaaagaattcgaactggcattaaatcta
ttgaatgtcaattccatagatggagcgcaaaaagagcaacaaacacgtcgtataaaaatc
ttattggcttttgatttgtttgcaaagcattatttccaacgggcctttaaatattttact
gaacttaatttagatgttcgtatcattattggattatttcctggtttaatgggggaagaa
ccgttgacaaatttcaaatatcctatagaaattacacgtctaccatcaactgctgaacag
aatggattaacattcttagcagagtatcttactgatgctagaaataactatatcaaagaa
aagaaaaatagtaacccaaacgatatcgaagaagggaagaaacgagatagtttattgcaa
gttattgatacaactttgttaaaatgctatataaagactggcaatggtgtagtaaaatct
ctcttacgccttaaagataacaattgtcatatagatacaagtgttaaagtcctaaaagaa
acgaacagtttggaagaacttgttatactttatgaaagtaaagggctacatgaacgagct
ctagagttactaaaaagtgaagccaagagaagtgattctccattatctggatatgataaa
attattagttatttgcagaagctgggtgagcaaaatttaaagttaatatttaagttttct
gcatgggtattaaaaacaagtcccgatagtggtctaatgatatttattgatgaaaataca
ccagaagttgaaagcctccctcgtggaaaagtttataagcacttgcaaaattattgtccg
gaattgtgtattccatatttggaacatattatacatacatggaaagaagaagaaagtgaa
ttccataacgatctcattaagttgtatcttcaagaagtagaaaacgaaactgtaaaaaat
tccaatgggttatttgaagagagagcattattgttgggacgtcttggtcgtcatgatcaa
gccttagcaatttacgttcatgtagtaaaagatgataaaatggctgaagagtactgttgg
agacattataatagtgaaggtagtggacataatgaggtctaccaccacttccttagaatg
tacctctctccgcctgatccgaaaggattaggcatcaaagtggatatacctaaacttgaa
ccaaatgttaaaagagctttagaaatactagaaaaatattacgatcgtattaacacagcg
gaggcattagtccttctgcctcctactatgaaagtgaacgagattgcctccttccttatg
aatgtggttgaagatcgaacctcacgacgtcgtaatggtctcatattaaagagtctgctg
tattcgcaacgtctgcaagttcaagagttacgaatgcagtacaggaaaaactcttcaaac
atatcggaagataagtcatgtcgtgtttgtggtcaaaggatcggtgtcagtgcatttgcc
cgttaccctaatggagttgttgttcattatggatgttgtacggatcttaaaagcatgcaa
ttctatcgtgcatggtgtaaaataaaatacaaggtgttcagtttcgacccggaattgcta
gaaacattgaaagttttttcgtttactattaattga
DBGET
integrated database retrieval system