Trichoplax adhaerens (placozoan): TRIADDRAFT_63649
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Entry
TRIADDRAFT_63649 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03013
Nucleocytoplasmic transport
tad03015
mRNA surveillance pathway
tad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRIADDRAFT_63649
09122 Translation
03013 Nucleocytoplasmic transport
TRIADDRAFT_63649
03015 mRNA surveillance pathway
TRIADDRAFT_63649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tad03019
]
TRIADDRAFT_63649
03041 Spliceosome [BR:
tad03041
]
TRIADDRAFT_63649
Enzymes [BR:
tad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TRIADDRAFT_63649
Messenger RNA biogenesis [BR:
tad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
TRIADDRAFT_63649
Spliceosome [BR:
tad03041
]
Complex C
Other components
EJC/TREX
TRIADDRAFT_63649
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
TRIADDRAFT_63649
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
ResT-TelK_cat
Motif
Other DBs
NCBI-GeneID:
6751181
NCBI-ProteinID:
XP_002109407
JGI:
63649
UniProt:
B3RP53
LinkDB
All DBs
AA seq
425 aa
AA seq
DB search
MAEVDHELLDYDEEENDAAEELESATTGNNKEVKGSYVSIHSSGFRDFLLKPELLRAIVD
CGFEHPSAVQHECIPQAILGMDVICQAKSGMGKTAVFVLATLQQLDPVDNEVSVLVLCHT
RELAFQISKEYDRFSKYMDNVKVAVFFGGINIKKDQATLKSSCPHIVVGTPGRMLALVRE
KSLNLKNCKHFILDECDKMLEQLDMRRDVQEIFRMTPHQKQVMMFSATLSKEIRPVCKKF
MQDPMEVYVDDDTKLTLHGLRQHYVKLKDHEKNRKLFDLLDILEFNQVIIFVKSVQRCVA
LTQLLVEQNFPAISIHRGMSQEDRLKHYGEFKNFNKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAVTFVSSQEDAKILNEVQDRFEVSVGELPEVIDVTT
YIELH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagtagatcacgaattgttggactacgatgaagaagaaaatgatgctgcagaa
gagttggaatccgctactaccggtaacaataaggaagtcaaaggctcatatgtgagtatt
cacagttcaggatttagagattttcttctcaagccggaattgttacgtgccatcgtcgac
tgcggttttgagcatccttcagcggtgcaacatgaatgtatccctcaggctatattaggc
atggatgttatttgtcaagctaaaagcggtatgggtaagactgctgtctttgtccttgcg
acattgcagcagctcgaccctgtcgataatgaagttagcgtgttggttctatgccatacg
cgtgaactcgcctttcagattagtaaagaatacgatcgcttttccaaatacatggataac
gtgaaagttgctgtcttttttggtggtatcaacattaaaaaagaccaggcaacgttgaag
agtagctgtccacatattgtcgtgggtacgcctggcagaatgttggctcttgtacgcgaa
aaatcattgaacttgaaaaattgcaaacattttattttggatgaatgtgacaaaatgtta
gaacaacttgatatgaggcgtgatgtacaagaaatatttcgtatgacaccgcaccagaag
caggtcatgatgtttagcgctacgttatccaaagaaatacgtccagtttgcaagaaattt
atgcaagatcctatggaagtatacgtggatgatgataccaagctaacgttacatggtcta
cgtcaacattacgtaaagcttaaagatcatgaaaaaaatcgcaagttattcgacttgtta
gatatcttagagttcaatcaagtaatcatcttcgtcaaatctgtccaacgttgtgtcgct
ctaacgcagttacttgtagaacagaacttccctgctatttcaattcatcgcggaatgtct
caggaggaccgattgaagcattatggtgaatttaagaatttcaacaaacggatcctagtt
gctacgaatttattcggacgtggaatggatattgaacgtgttaatatagtatttaattat
gatatgccagaagattccgatacttacttgcatcgggttgcacgtgctggtcgtttcgga
actaaaggtctagccgttacattcgtgtctagccaggaggatgcgaaaattttaaacgaa
gttcaagatcgctttgaagttagcgttggtgaattaccagaagtgatcgatgtaacaaca
tacatcgaacttcactaa
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