Tepidanaerobacter acetatoxydans Re1: TepiRe1_0045
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Entry
TepiRe1_0045 CDS
T02434
Symbol
ykfD
Name
(GenBank) putative cell wall oligopeptide ABC transporter (ATP binding protein)
KO
K10823
oligopeptide transport system ATP-binding protein
Organism
tae
Tepidanaerobacter acetatoxydans Re1
Pathway
tae01501
beta-Lactam resistance
tae02010
ABC transporters
tae02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tae00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TepiRe1_0045 (ykfD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TepiRe1_0045 (ykfD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TepiRe1_0045 (ykfD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tae02000
]
TepiRe1_0045 (ykfD)
Transporters [BR:
tae02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
TepiRe1_0045 (ykfD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA
ATP-synt_ab
PRK
AAA_22
AAA_16
AAA_30
Mg_chelatase
AIG1
tRNA_lig_kinase
AAA_29
AAA_13
AAA_5
Motif
Other DBs
NCBI-ProteinID:
CDI40263
UniProt:
U4Q7P8
LinkDB
All DBs
Position
43754..44785
Genome browser
AA seq
343 aa
AA seq
DB search
MPAGCCMRKPKMCGSLLTCEVNKLHENNDYLLEVKNLKKYFKVGANQILKAVDDVSFSIK
EGETLGLVGESGCGKSTTGKTIARLYAPTGGKVIFEGKNAHKLTGQEAREFSKKVQMIFQ
DPYASLDPRMTVKDIIGEGIDIHNLYKGKEKLQRIYELLNLVGLNKEHADRYPHEFSGGQ
RQRIGIARALAVEPTFIVCDEPISALDASVQAQIVNLLISLQHKLRLTYLFIAHNLIMVK
HLSDRVAVMYLGNIVELADSSELYDNPLHPYTKALISAIPIADPKLERSRQRLLVEGDVS
NPINPPPGCLFKSRCKFAKSVCGQIKPPLKEISSNHFISCYLY
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgctggctgctgcatgagaaagccaaaaatgtgcggcagtcttttaacctgtgag
gtgaacaagttgcatgaaaataacgattacctgcttgaagtaaaaaatctaaaaaagtat
ttcaaggttggtgcaaaccaaatattaaaagcggtagatgatgtaagtttttccataaaa
gaaggagagacattagggcttgttggcgaatccggctgcggaaaatctactacaggaaaa
actattgcaagactatatgctccaacaggcggcaaggttatatttgaagggaaaaatgcc
cacaaattaactggacaggaagcaagagagttttccaaaaaggttcagatgatatttcaa
gacccttatgcatctcttgatcctagaatgacagtaaaagacataatcggcgaaggcatt
gatatacacaacttatacaagggcaaagaaaaacttcaaagaatatatgaattgctaaat
ctcgtaggtttaaacaaagaacatgcagacagatatcctcatgaattttcagggggacaa
agacagcgtataggaattgccagggcactggcggtggaacctacctttatagtatgtgat
gagcctatctcggctcttgatgcctcagttcaggcacaaatagtaaatctgcttatatca
ctacagcacaaacttcggctcacctatctttttatagcccataacttaattatggtaaaa
catttatcagacagggttgcagttatgtatcttggcaatattgtggaacttgcagacagc
agcgagctttatgataatcccctgcatccgtatactaaagctctaatttctgcaataccc
atcgccgatcctaagctggaaagaagtcggcagaggctgctcgttgaaggcgatgtatca
aaccccataaacccgcctcccggctgtttattcaagtcgaggtgcaaatttgcaaaatcc
gtatgcggacagataaagccgcccctcaaggagataagctctaaccactttatatcatgc
tatctgtattag
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