Tepidanaerobacter acetatoxydans Re1: TepiRe1_0744
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Entry
TepiRe1_0744 CDS
T02434
Name
(GenBank) DNA-(Apurinic or apyrimidinic site) lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
tae
Tepidanaerobacter acetatoxydans Re1
Pathway
tae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TepiRe1_0744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tae03400
]
TepiRe1_0744
Enzymes [BR:
tae01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TepiRe1_0744
DNA repair and recombination proteins [BR:
tae03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TepiRe1_0744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
CDI40472
UniProt:
F4LW96
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All DBs
Position
747096..747953
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AA seq
285 aa
AA seq
DB search
MKIYFNNILPFNLEIIADGGQAFRWNRSEDGKYIGVVEDYIFEVVQANDELIIDSNLEGK
EEAFAKEYFDLPRDYEQIEKELMCFKEVAAAVNYCSGYRILFQDPWETTISFIISANNHI
RNIKSTIENMCKIYGEPLEYRGKTYYSFPSPDRLASLSEDELKKTKCGYRAKYIIETARM
IADGKVDLYGLRELPTDEAREVLLTLPGVGRKVADCIMLYSMRKFDAFPIDVWIKRVLEH
IYFSGNQIPIKKLQKFAEKKFGDRAGFMQQYLFYYSRNYLQDIIK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatatattttaacaatattcttccatttaatcttgaaataatagccgacggaggc
caggcatttcggtggaatcgcagcgaagatgggaaatatatcggtgttgttgaagattat
atttttgaggttgtccaggccaatgatgagctaataattgattctaacttagaaggcaaa
gaagaagcatttgctaaggaatacttcgatctgcctagagattatgaacagatagaaaag
gaattgatgtgctttaaagaggtagctgctgcggttaattactgcagtggatatagaatc
ctttttcaagatccgtgggaaaccaccatatcttttattatatcggcaaacaatcatatt
agaaatattaaaagtaccattgaaaatatgtgtaaaatctatggagagccattggaatac
agaggaaaaacttactattcttttccttctccggacagactagcaagcctatcagaagat
gagctaaaaaagacaaaatgcggttacagagccaagtacatcatagaaacagcaaggatg
atagcggatggtaaagttgatttatatggtttaagagaactgccgacagatgaagccaga
gaagtgctattgaccttgcccggcgttggcagaaaagtggcagattgtataatgctttat
tccatgagaaagtttgatgcgttccctatagatgtatggataaaaagggttcttgaacat
atttatttcagcggcaaccaaatacctattaaaaaactccaaaaatttgcggagaaaaaa
tttggcgatagagcaggtttcatgcagcaatatcttttttactattcccgaaattacttg
caagatattataaagtga
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