Tepidanaerobacter acetatoxydans Re1: TepiRe1_0939
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Entry
TepiRe1_0939 CDS
T02434
Symbol
rlmCD
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
tae
Tepidanaerobacter acetatoxydans Re1
Brite
KEGG Orthology (KO) [BR:
tae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tae03009
]
TepiRe1_0939 (rlmCD)
Enzymes [BR:
tae01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
TepiRe1_0939 (rlmCD)
Ribosome biogenesis [BR:
tae03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
TepiRe1_0939 (rlmCD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_15
Cons_hypoth95
Methyltransf_25
MTS
UPF0020
PrmA
Methyltransf_11
PCMT
N6_N4_Mtase
Ubie_methyltran
Methyltransf_12
Methyltransf_4
RrnaAD
FtsJ
DOT1
TRM5-TYW2_MTfase
N6_Mtase
MptE-like
MetW
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
CCP25658
UniProt:
F4LXE2
LinkDB
All DBs
Position
942952..944334
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AA seq
460 aa
AA seq
DB search
MKNKIKAALQLNGRYEVQIEKMAHEGQGIGKIDGITVFVEGAVPKEKCQIEIVKVKKDYA
IGQVIKVLTPSPDRKVPQCINADKCGGCNLQHMTYEAQLLFKTSKVKDSLKRIGHIDAEV
IDTIGMQQPWHYRNKSQYPVAKQGNSTVMGFYKKRSHDIVDLENCLIQHPISDKVMQIIK
RWLTRYDISIYDELKHEGLIRHVMVRVGNKSKEVMAALIANGKEIPHTDDLIKMLQCDIP
GFKSLILNINTKKTNVIMGEKNITLYGSPYIYDYIGDIKFRLSPLSFFQVNPIQAEVLYN
KVLEYAGITQDEIVLDLYCGTGTITLFLAQKAKKAYGIELVSQAVADARLNAKINGINNA
EFIEGAAEAVLPKMAEEGIKPDIIVVDPPRRGCDEKTLKTITKISPKKIIYVSCNPATLA
RDLRYLEDKGYKTQKAQPVDMFPQTSHVECVVLMTNVKNK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaataaaataaaagcagcattgcaactaaacggtcgttatgaagtgcaaatagaa
aagatggcacatgaggggcagggaataggaaagatagatggtattaccgtctttgtggaa
ggtgcagtgccgaaagaaaaatgtcagatagaaatagttaaagttaaaaaggactatgct
attggacaagttataaaggtacttacaccttcacccgacagaaaagttcctcaatgcata
aatgccgacaaatgcggtggctgcaatcttcaacatatgacctacgaagctcagcttttg
tttaagacttcaaaagtaaaagacagcttaaaacgaatcggacatattgatgccgaggtt
atagatacgataggcatgcagcagccttggcactatagaaacaaatcccaatatcccgtt
gccaagcagggcaacagcacggtaatgggtttttataaaaagcgaagccatgacatcgta
gacttagaaaattgcttaatacaacatcccataagtgataaagtaatgcaaattataaag
agatggttaacgaggtatgatatttcgatatatgatgagttaaaacatgaaggcttaatt
cgccatgtgatggtaagagttggcaataagagcaaagaagtgatggctgcattgattgca
aacggaaaagaaattcctcacacagatgatttaataaaaatgcttcagtgtgacatacca
ggtttcaagagccttatattaaatattaatactaaaaaaaccaatgtaataatgggtgag
aaaaacattacattatatggcagcccatatatatatgactatataggcgacattaaattt
aggctttcacctctatcatttttccaagtcaatccgatacaggcagaagtcttatacaat
aaagtgctggaatatgcaggcattacccaagatgaaattgttctcgatctatactgcggc
acaggaaccattacactatttttagcccaaaaagcaaaaaaagcttatggaatagagctg
gtttcacaagctgtagccgatgcccgcctaaatgccaaaataaacggtattaataatgcg
gagtttatagagggggcggctgaggcagttctaccaaaaatggcagaggaaggcattaaa
cccgatataatagtagtagaccctccccgccgcggatgtgatgaaaaaaccctaaaaacc
ataacaaaaatatcccccaaaaagattatctacgtctcatgcaatcctgccacccttgca
agagatttacgctatctcgaagataagggatacaaaacccaaaaagcccaacccgttgat
atgtttccgcagacaagccatgtggagtgtgtggtgttgatgacaaatgtaaaaaacaaa
taa
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