Tepidanaerobacter acetatoxydans Re1: TepiRe1_1320
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Entry
TepiRe1_1320 CDS
T02434
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tae
Tepidanaerobacter acetatoxydans Re1
Brite
KEGG Orthology (KO) [BR:
tae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tae03032
]
TepiRe1_1320 (topA)
03400 DNA repair and recombination proteins [BR:
tae03400
]
TepiRe1_1320 (topA)
Enzymes [BR:
tae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
TepiRe1_1320 (topA)
DNA replication proteins [BR:
tae03032
]
Prokaryotic type
DNA Topoisomerases
TepiRe1_1320 (topA)
DNA repair and recombination proteins [BR:
tae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TepiRe1_1320 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DmmA-like_C
Zn_ribbon_recom
Ogr_Delta
Toprim_4
Zn_ribbon_PaaD
cNMPbd_u2
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
CCP26049
UniProt:
F4LTM6
LinkDB
All DBs
Position
1259525..1261597
Genome browser
AA seq
690 aa
AA seq
DB search
MAKSLIIVESPAKAKTLSKYLGKNYKIEASMGHIKDLPKSQLGIDIESGFAPKYITIRGK
GPLLNNLKKEAAKADKILLATDPDREGEAISWHLANALDISESEPCRIEFYEITKNAVLE
SLKNPRTINTDLVEAQQARRILDRLVGYKISPILWRKVKWGLSAGRVQSVAVRIICDREK
EIKEFIPDEYWTIDADLKGDKDKIRARLHSKNNKKIKIENKEQADMILEEIKNKTFEVAE
IKTSERKKMPPLTFTTSSMQQEAARKLGFTAKKTMMIAQQLYEGLDIKGEGAVGLITYMR
TDSTRISEQAKKEAAEYIGYNYGKEYLGSGYTARKNNKKNVQDAHEGIRPTSVIRTPEKV
KDSLTKDQYKLYKLIWDRFVSSQMAAAVYDTVSVSIKAGEYIFKVSGSTVKFPGFMLLYT
EGSDEDSEKDDSKIPQLKEGQVLKLLKLLPEQHFTQPPPRYTEAMLVKVLEEKGIGRPST
YAPTIDVIQKRGYVEKEKGRFKPTELGEIVVQILQEFFSDIVDIDFTAEMEEKLDKIESG
HQKRQELLESFYTSFEKKLKIAEQELKKVKIEDEISDEKCEFCGRNMVIKNGRYGKFLAC
PGFPECKNTKPIITEIGVKCPQCGGNLIVRKSKRGRTFYGCSNYPNCKFVSWNKPSDKPC
PKCGALMVIKKTKNGEHKVCTNKECGYKSK
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggctaaatctttaattattgtggaatctccagcaaaagcaaaaaccctaagtaagtat
ttaggtaaaaattacaaaatagaggcttcaatgggtcatataaaggatttaccgaagagt
caactaggtatagatattgaatcaggatttgcgcctaaatatattacgatacgaggtaaa
ggcccactccttaacaatttaaaaaaagaggccgcaaaagccgataaaatattattggca
actgacccggatagagaaggcgaagctatttcctggcacttagcaaatgctttagacata
tcggaaagtgaaccatgccgtatagaattttatgagattacaaaaaatgctgttttagaa
tccctcaaaaatcccaggactataaacacagatttagttgaagcacagcaagccagaaga
atcctagatagattagttgggtataagattagtcctatattgtggagaaaagtaaaatgg
ggtcttagcgcaggaagggtacaatcagttgctgttagaattatctgtgatagagaaaaa
gaaataaaagaatttattcccgatgaatattggacaattgatgctgatttaaaaggcgat
aaagataaaatcagagctcgccttcattcaaaaaataataagaaaataaaaattgaaaat
aaagaacaagcagatatgattctggaggaaataaagaataaaacttttgaagttgcagaa
ataaagaccagtgaaagaaagaagatgcctcctcttacttttacaaccagcagcatgcaa
caggaagcagctcgaaagcttggatttacagctaaaaaaaccatgatgattgcacagcaa
ttatacgagggtttagatatcaaaggagaaggtgcagtaggattaataacttatatgaga
acggattctacaagaatatctgaacaagctaagaaggaagcggcggaatatataggatat
aactatggcaaggaatatttaggaagtgggtatacggcacgcaaaaacaataaaaaaaat
gtgcaagatgctcatgaaggtattagacctacatcagtaataagaacacccgaaaaggta
aaagactcacttacaaaggaccaatataaattgtataagcttatatgggatagatttgtt
agtagtcaaatggcagctgctgtatatgatacagtatctgttagtattaaggcgggagaa
tatattttcaaagtttcaggttcaactgttaaatttccgggctttatgttattatataca
gaaggttctgatgaagattctgaaaaagacgacagcaaaattccgcaattaaaagaaggt
caggttctcaagttactaaaattacttccggaacaacattttacacaaccaccacccaga
tataccgaagctatgttggtaaaggttcttgaagagaagggtataggcaggcctagcact
tatgcacctactattgatgtcatacaaaagcgcggatatgtggaaaaagaaaaaggacgt
tttaaaccgacagaactaggggaaatcgtagtacaaattttacaagaatttttcagcgat
atagtagatatagatttcacggcagaaatggaagaaaaactggataaaatcgagtcgggt
catcagaaacgtcaggaactgcttgaatcattttatacttcttttgaaaaaaaattaaaa
atcgctgaacaagaattaaaaaaggttaaaattgaagatgaaataagcgatgaaaagtgc
gagttttgtggaagaaacatggttataaagaatggaagatacggtaaatttttagcatgt
ccgggatttccggaatgcaaaaacacgaaacctattataaccgaaattggagtgaaatgc
ccccaatgcggtggtaatcttatagtaagaaaatctaaacgaggaagaactttttatggt
tgctctaattatcccaattgtaaatttgtatcttggaataaaccgagcgataaaccttgt
ccaaaatgcggagctttaatggtaataaagaaaacaaaaaatggagaacataaagtttgt
actaataaagagtgcggctataagtcaaaatag
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