Tepidanaerobacter acetatoxydans Re1: TepiRe1_1387
Help
Entry
TepiRe1_1387 CDS
T02434
Symbol
pnpA
Name
(GenBank) polynucleotide phosphorylase (PNPase)
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tae
Tepidanaerobacter acetatoxydans Re1
Pathway
tae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TepiRe1_1387 (pnpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tae03019
]
TepiRe1_1387 (pnpA)
03016 Transfer RNA biogenesis [BR:
tae03016
]
TepiRe1_1387 (pnpA)
Enzymes [BR:
tae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
TepiRe1_1387 (pnpA)
Messenger RNA biogenesis [BR:
tae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TepiRe1_1387 (pnpA)
Transfer RNA biogenesis [BR:
tae03016
]
Prokaryotic type
tRNA degradation factors
TepiRe1_1387 (pnpA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
Par3_HAL_N_term
GcvP2_C
KH_2
aRib
Motif
Other DBs
NCBI-ProteinID:
CCP26125
UniProt:
F4LU92
LinkDB
All DBs
Position
1320900..1323002
Genome browser
AA seq
700 aa
AA seq
DB search
MPEFKTEIGGRKLIIETGKVAQQANGSVMIRYEDTVLLVTATASKKPREGVDFLPLTIDY
EEKLYAVGKIPGGFIKREGKPSEKAILSARLIDRPLRPLFPKDFRNDVQVIATVLSVDQD
NTPDIVAINGASCALCISDIPFEGPVGAVSVGLIDGKYVINPTVSEAEKSRLRLVVAGTK
EAVLMVEAGADEVSENEMLSAILYGHEEIKKIIAFQEEIINEIGKTKMEITAEEIDDELE
KSVREFATEDILKAIRIYDKQEREAYIDKINEDTLLHFQDIYPDTEKQITDVLYDILKEE
VRKMISYEGIRPDGRTPNQIRPISCEVGILPRTHGSGLFTRGQTQVLTVATLGALGDVQI
LDGLGIEESKRYMHHYNFPPYSTGETKVIRGPGRREIGHGALAERALEPMIPSEEDFPYT
IRLVSEVLSSNGSSSMASVCGSTLALMDAGVPIKAPVSGVAMGLIKQGDKVTILTDIQGM
EDFLGDMDFKVAGTKNGITAIQMDIKIKGIDEDILKSALQQAREGRLFIMDKMLSVIPEP
RKELSAYAPRIFTITVDPDKIRDIIGPGGKTINKIIAETNTKIDIEDDGKVYISAPEESA
GIKAMEIIDKITQDVEVGRIYMGKIMRTTNFGAFAEILPGKEGLIHISKLSKERVKRVED
VVKVGDEILVKVTDIDKQGRINLSHKDALNETQTKKSIEA
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
ttgccagaatttaaaacagaaataggtggtcgtaaattaatcatagaaacaggcaaagtg
gctcagcaagccaatggttcagttatgattagatatgaagatactgtgttattagtgacg
gctacagcttctaaaaagccccgagaaggtgtagactttttgccgcttactatcgattat
gaagagaaattatatgccgtaggtaagattcccggaggttttattaaaagggagggaaaa
cccagtgaaaaggccatcctttcggcacgcttaattgataggccgttgagacctttattt
cccaaagattttagaaatgatgtacaggtaattgctaccgttttatcagtagaccaagac
aatactcctgatattgttgctattaatggtgcatcatgtgcattgtgtatctcggatata
ccatttgaaggtcctgtcggagcagtatcagtaggcttaattgatggcaaatatgtaata
aaccctacagtgtctgaagctgaaaaaagtcgtctcagactggtagtagccggaactaaa
gaagcagtacttatggttgaagctggtgccgatgaagtatccgaaaatgaaatgttaagt
gccatcctctatggccatgaggaaattaaaaagattatagcttttcaagaagaaataatt
aatgaaatcggtaaaactaaaatggaaataactgcggaagaaattgatgatgagttagaa
aaatcggttcgcgaatttgcaactgaagatatattaaaagccattagaatttatgataag
caagagcgagaagcttatattgataagataaacgaagatactttgctgcattttcaagac
atttatccggatacggaaaaacaaataactgatgtattatatgatatcctaaaagaagaa
gtaagaaagatgatttcatatgaaggcattagacccgacggcagaacacccaatcaaata
aggccgatttcttgtgaagtagggattttacctaggactcatggctcaggcttatttacg
cgcggacaaacacaggttcttacagtagcaactctcggagctttaggtgatgttcagatt
ttggatggtctaggtattgaagagtcaaaaagatatatgcatcattataattttccgcca
tatagcacaggtgaaacaaaagttattagaggaccggggcgaagagaaataggtcatggt
gccttggccgaaagagctcttgagccaatgattccctcagaggaagattttccatatacc
ataagattagtttcagaagttttaagctctaacggttccagttcgatggcaagcgtatgc
ggttcaacacttgcattaatggatgccggtgtacctataaaagcacctgtttcaggtgta
gctatgggcttaattaagcaaggggataaagttacaattttgaccgatatacagggtatg
gaagattttttaggcgacatggattttaaagttgcaggaacaaaaaatggtattactgca
attcagatggatattaaaataaagggaattgatgaagatatactgaaaagtgccttgcag
caagcaagggaaggccgtctattcattatggacaagatgctgtcggtaatccctgaacct
agaaaagaattatctgcctatgctccaagaatatttacgattactgtagacccggataaa
atccgagacattataggtccgggagggaaaactattaacaagataattgcagaaacaaat
acaaaaattgatatcgaagacgatgggaaggtctatatatctgcacctgaagagtcagcg
ggaattaaagcaatggaaataattgataagattacacaggatgttgaagtgggtcgaata
tatatgggtaaaataatgcgtacgactaattttggagcttttgcggagatattgccaggg
aaggaaggcctaattcacatttcgaagttatccaaagagagagtaaaacgggtagaagat
gtagtaaaagttggtgatgagatcctagtaaaagtaactgatattgataaacaaggtagg
attaacttatcgcacaaagatgctcttaatgaaacacaaactaaaaaaagcatcgaagca
taa
DBGET
integrated database retrieval system
