Tepidanaerobacter acetatoxydans Re1: TepiRe1_1821
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Entry
TepiRe1_1821 CDS
T02434
Name
(GenBank) Helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
tae
Tepidanaerobacter acetatoxydans Re1
Pathway
tae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TepiRe1_1821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tae03400
]
TepiRe1_1821
Enzymes [BR:
tae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
TepiRe1_1821
DNA repair and recombination proteins [BR:
tae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TepiRe1_1821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
AAA_22
HHH_2
nSTAND3
SLFN-g3_helicase
T2SSE
HHH
Helicase_RecD
AAA_16
PIF1
DEAD
SRP54
AAA_28
MeaB
HHH_3
NPHP3_N
UvrD-helicase
AAA
PhoH
UvrD_C
TrwB_AAD_bind
AAA_5
HerA_C
MobB
NTPase_1
AAA_24
cobW
AAA_7
Rad17
ResIII
ABC_tran
ATP_bind_1
AAA_12
TsaE
DUF815
KTI12
CbiA
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
CCP26619
UniProt:
F4LWV3
LinkDB
All DBs
Position
complement(1742292..1744493)
Genome browser
AA seq
733 aa
AA seq
DB search
MIELEGVVERITYYNEENGFTVAKITVKDNDDLITAIGYFHCLEVGEVLKLRGNWTIHKD
YGHQFKVEFYETIMPATVRGIENYLASGVIRGIGPTMAKKIVKEFGEKTLEVLSNSPEKL
LSVPGIGEKKLKMITESYSQQQETRDIMLFLQEYGIGPNVAVKIYKNYKEKSIQILKQNP
YRLADEVYGIGFKTADYIAQKMGMERDSMERLCAGLKYAVVKAADEGHVFMPLEELLYKA
SELLSVEKEPLNQAFLALEEKKDIVVERAWGREDVYLAAFYYSEKAVARRLFLLAAMIDE
PLEITDETINEIEKCCNIRLAKRQREAIEKAAQHGVLVITGGPGTGKTTTIQSLLEFFKK
QELKVALAAPTGRAAKRMVETTGVEAKTIHRLLEYNAYEQGGMAFGKNQDDPLDEDVIIV
DEMSMVDIILMHHLLSAVRPGARLILVGDKDQLPSVGPGSVLREIIESDKIPVVVLDEIF
RQAQESMIIVNAHRINKGYFPYINVKDKDFFFEQVLLPEDILETILEMTKNRLPNYGDFD
PLEDIQVITPMKKGLVGVANLNDKLQFLLNPPSRRKKEYHYRACVFREGDKVMQIKNNYD
KEVFNGDLGRIVRIDDEDVVIVSFADAWQEREVAYQGQEIEELSLAYALSVHKSQGSEFP
VVIMPITTSHYVMLQRNLLYTAVTRAKKLIVLVGTKQALTIAIQNNRSLRRYGHLSDRII
DEFSQAIFRDGSI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgattgagctggaaggtgttgtagagagaattacatattataatgaggaaaatggtttt
actgttgcaaaaattacagtaaaagataacgatgatttgattacggctatagggtatttt
cactgtcttgaagtcggggaagtattaaaactcaggggaaattggactatacataaagat
tacgggcatcagttcaaggtcgagttttatgagacgattatgccggcgactgtcaggggc
atagaaaactatttggcatcaggggtaattcgcggcataggtcctacaatggcaaagaaa
atcgtgaaagaatttggagaaaaaactttggaggtcttaagtaactcacctgaaaagctt
ttaagtgttcccggtattggagagaaaaaacttaaaatgataactgaatcctatagccag
caacaggaaactcgcgatatcatgttgtttcttcaagaatatggaattggtcctaatgtg
gcggtaaaaatatataaaaactataaagaaaaatcaattcaaatactgaagcaaaaccct
tatcgcttagcagacgaagtgtatggaatcggatttaaaacggccgactacattgctcaa
aaaatgggtatggaacgcgactctatggaacgcctatgtgccggcttgaaatatgctgta
gtaaaggctgcggatgaaggccatgtttttatgccgcttgaggaattgctgtataaagct
tcggaacttttatccgtagaaaaagagcctttaaatcaagcttttttagcgcttgaggaa
aagaaagatattgttgtagagagggcatggggcagggaagatgtgtatttggccgctttt
tactattcggaaaaggccgttgctcgcaggctttttttattggctgctatgatagatgag
ccgttggaaattaccgatgaaactataaatgagatagaaaagtgctgcaatataaggctg
gctaagcgtcaaagggaagctattgaaaaagcggcacagcatggtgtgttggtaattacg
gggggtccgggcaccggtaaaaccacaacaattcagagcttattggaatttttcaaaaaa
caagaattaaaggtggcacttgcagcgccaacgggtcgagctgcaaaacggatggtagaa
accacaggagttgaagcaaaaacaatacacagattgttagaatataatgcatatgagcaa
ggaggcatggcttttggcaagaatcaggacgatcctttagatgaagatgttattattgtc
gatgaaatgtccatggttgatataattctcatgcatcatctgctgtctgcggtaagaccg
ggtgctcgacttattttagtaggagataaagaccagcttccgtcggtaggaccgggcagt
gtcttgagagaaatcattgaaagcgataaaattccagtagtggttcttgatgagatattt
cggcaagcacaggaaagcatgattattgtcaatgcacataggataaataaaggttatttt
ccatatataaatgtgaaagataaggacttttttttcgagcaggttcttctgcctgaggat
atattggaaactatcttggaaatgactaaaaaccgtttgcctaattatggagattttgat
ccgctagaggatatccaggtaattacaccgatgaaaaaagggttagtaggtgttgctaat
ctaaacgacaaattgcagtttcttttaaatccgccaagcaggcgcaagaaggaatatcat
tatcgtgcatgtgtgtttcgtgaaggtgacaaagtcatgcagattaaaaacaattacgat
aaagaagtatttaatggcgacttaggccgaatcgttagaattgatgatgaagatgtagtc
atcgtgagttttgcagatgcatggcaagaaagggaagtggcttatcaaggtcaagaaata
gaagaattgagtcttgcttatgctctctccgttcataagagccaaggcagcgaatttccg
gtagttattatgcctatcacaacctcgcactacgtgatgctgcagaggaaccttttatat
actgccgttacgagggctaagaaactaatagtgcttgtgggtacaaaacaggcactaaca
atagccatacaaaacaacaggtcattgagacgctatggccatctaagtgacaggataatc
gacgaattttcccaagcaatttttagggacggttccatttaa
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