Tepidanaerobacter acetatoxydans Re1: TepiRe1_1932
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Entry
TepiRe1_1932 CDS
T02434
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
tae
Tepidanaerobacter acetatoxydans Re1
Brite
KEGG Orthology (KO) [BR:
tae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tae03016
]
TepiRe1_1932
Enzymes [BR:
tae01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
TepiRe1_1932
Transfer RNA biogenesis [BR:
tae03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TepiRe1_1932
Prokaryotic type
TepiRe1_1932
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
AFOR_C
Motif
Other DBs
NCBI-ProteinID:
CCP26749
UniProt:
F4LXJ4
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All DBs
Position
complement(1850723..1851910)
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AA seq
395 aa
AA seq
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MKIKATTEDFIVKELIDLEIKDDGAYRIYLLEKRHWNTMDALLAIARQNKMPMARIGYGG
RKDRHALTYQYISVPREYDLSFNMPKIKLTFIGFADDYVSPAILKGNYFELTLRKIPTAQ
KTSVAKRLNEVARCGFPNYFDDQRFGSVINPEEFLAERIIRKHYKGALKLYLTSIYPEDR
GKEKERKRAIEKQWGDWQAILPLCRTAAEKDIVKILAKGESKYQLVKAINAIPKEELSMH
FSAYQSFLWNQSLERILLQYITNPIKIKGRIMNYYFYETLEENTLNTLKQLNIPTVSYKI
FGDPKAIDAVLEVLSERNLKPSDFNLTKIRKSFFKTFPRPAITIPKFLRTVPLDSSDILQ
SFAKDDIYPGYLKLKIRFILPPGSFATMLVKSLES
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaataaaagcaacaactgaggactttatcgtaaaggaactgatagatttagaaatc
aaggatgatggtgcataccgcatataccttctggaaaaacgccattggaataccatggat
gcacttttggccattgcccggcaaaataagatgcccatggcacggataggatatggaggc
cgaaaagaccggcatgcccttacatatcaatatatctccgtgcccagggagtatgacctt
tctttcaatatgcccaaaatcaagcttacctttataggttttgcggatgattatgtatct
cccgcgatattaaaaggaaattactttgaattgacacttaggaaaataccaacagcacaa
aaaacatcagtagcaaagcgcttaaatgaagttgcccgctgcggctttccaaactacttt
gatgatcagcgcttcggcagtgtaataaatcccgaagagtttttagcggaaaggattata
aggaaacattacaagggagccttaaaactttacttaaccagcatatacccggaagacaga
ggcaaagagaaggaaagaaaaagggcaatagaaaaacagtggggagactggcaggcaata
ctccccctatgccgcacagcggcagaaaaagacattgtaaagattcttgccaaaggagaa
agtaaatatcaattagtaaaagccatcaatgccatccccaaagaagaactttcaatgcat
ttttctgcatatcaaagctttttgtggaatcaaagcttagagcgcatactccttcaatat
ataacaaaccccatcaaaataaaaggaaggattatgaactactatttctatgaaaccctt
gaagaaaatactttaaatacattaaagcagctcaacatcccaaccgtatcctacaaaatc
ttcggagatcccaaagctatcgacgctgtcctggaagtcctctccgagcggaacctaaaa
ccatccgacttcaaccttaccaaaatccgaaaatccttcttcaaaaccttcccccgcccc
gccatcaccatccccaaatttttaaggacggttccacttgattcatcagatatcctgcaa
tcttttgcaaaagatgatatatatcccggatatctaaaacttaagataagatttatcctc
ccgcccggaagctttgctaccatgctggtaaaaagcttagagagttaa
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