Tichowtungia aerotolerans: GT409_02725
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Entry
GT409_02725 CDS
T07773
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
taer
Tichowtungia aerotolerans
Pathway
taer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GT409_02725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taer03019
]
GT409_02725
03009 Ribosome biogenesis [BR:
taer03009
]
GT409_02725
Enzymes [BR:
taer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GT409_02725
Messenger RNA biogenesis [BR:
taer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GT409_02725
Ribosome biogenesis [BR:
taer03009
]
Prokaryotic type
rRNA helicases
GT409_02725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QHI68415
UniProt:
A0A6P1MBC3
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All DBs
Position
complement(648967..650751)
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AA seq
594 aa
AA seq
DB search
MKFSDLGLSPELLAGIEKLGFETPTPVQGEVIPYLLDNDDDVVALAQTGTGKTAAFGLPI
LEQLDLTHCAPQALILCPTRELCMQIARDLQSFASCMPEVKVLAVYGGADIRRQLDALSA
GVQIIVATPGRMLDILRRKRADFSFIERVVLDEADEMLNMGFEEDIEAILSSVNDIAQTL
LFSATMPKEVAKIARNYMEDPHEITVGSRNAGAENVSHDYYVVHAKDRYRALRRIVDFYP
RMYGIVFCRTRMETQQVSDHLRKDGYSAEPLHGDLTQMQRDSVMKKFRDHHVQILVATDV
AARGLDVNDLTHVINYNLPDDLAAYTHRSGRTGRAGKEGISVSIIHMREHHKINRLQKAL
GKKFTQKPVPTGEEIARVRLMAMAERVRDWTGGPGLIDNYLEELTAMLADLSKEELIKRF
VSIDMHRMLLFYRDAPDLNVQPSERQSEPRRKDGPRESGREKRENHEPRQMTAGMVELVM
NVGKVNGVTPKKLMAMVNVADRDKSIEIGRINIVKMQSYFEVPRGDAMDVIDSFTKSYVD
CEGRQVSVAMAGNTKSRPNKPKRKGSPSDGKPFDKFKDKPRKGGRGQGGPRKRR
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaaattctccgacttggggctcagccccgaactgctcgccggtatcgaaaaactcggc
tttgaaacaccgacgcctgtccagggcgaggtaattccgtatcttctggataacgatgat
gatgtggttgcgctggcgcaaaccggcacgggcaaaaccgccgctttcggcctgccgatt
ctcgaacagctggatttgacgcactgtgcgccgcaggcgctgattctctgtccgacccgc
gagctgtgcatgcagattgcgcgcgacctgcagagttttgcctcctgtatgccggaggtg
aaggtgctggcagtctatggcggcgcggatatccgtcgtcagctcgacgcattgagcgcc
ggcgttcaaattatcgtggccactcccggtcgtatgctcgatatcctgcgccgcaagcgc
gcggacttttcctttattgaacgcgtcgtactcgacgaagctgacgaaatgctcaacatg
ggctttgaggaagacatcgaggcgattctgtcttccgtgaatgatatcgcgcagacgctc
ctgttttcggccaccatgcctaaagaggtagccaaaatcgcccgcaactatatggaggat
ccgcacgaaatcacggtcggttcgcgcaacgccggggccgaaaatgtcagccacgactat
tatgtggtgcatgccaaagaccgttatcgcgctttgcgccgcatcgtcgacttttacccc
cgcatgtacggcattgtcttctgccgcacccggatggagacccagcaggtttcggatcat
ctccgcaaagacggctacagcgccgagccgctccacggcgatctgacccagatgcagcgc
gacagcgttatgaaaaaattccgggaccaccacgtccagattctcgtggccaccgatgtc
gccgcgcgcggactggacgtgaatgatctgactcacgtcatcaattataatcttcccgat
gatctcgccgcctacactcatcgcagcggacgcaccggccgcgccgggaaagaagggatt
tctgtttcgatcattcacatgcgtgagcaccataagatcaaccgattgcagaaagcgctc
ggtaaaaagtttacgcagaaaccggtcccgaccggcgaggagattgcccgggtgcgcctc
atggcgatggctgaacgcgtccgcgactggacgggcgggcccggcttgatcgataactat
cttgaagaacttaccgctatgctggccgacctctccaaagaagagctgatcaaacgcttt
gtctcgatcgatatgcaccgcatgcttctgttctatcgcgatgcgccggatctcaatgtg
cagccttcggaacggcagagcgaaccccgcagaaaagacggaccgcgcgagtcgggtcgt
gagaagcgtgaaaaccacgagccgcggcagatgactgccggcatggttgagctcgtcatg
aacgtcgggaaagtcaacggggttacgccgaaaaaactgatggcgatggtcaatgtggcc
gatcgcgacaaaagcatcgagatcggtcggatcaatattgtaaaaatgcagtcctatttt
gaggtgccgcgcggcgatgccatggatgtgatcgacagttttaccaaaagttatgtcgac
tgtgagggccgtcaggtcagtgtcgcgatggcaggcaacacaaagtcccgtcccaataag
ccgaaacgaaaaggttctccatcagatggaaaacccttcgataagtttaaggataaaccc
cgcaaaggcggccgcgggcagggcggcccccgcaagcgccgctga
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