Tichowtungia aerotolerans: GT409_04895
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Entry
GT409_04895 CDS
T07773
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
taer
Tichowtungia aerotolerans
Brite
KEGG Orthology (KO) [BR:
taer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
taer03032
]
GT409_04895 (topA)
03400 DNA repair and recombination proteins [BR:
taer03400
]
GT409_04895 (topA)
Enzymes [BR:
taer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GT409_04895 (topA)
DNA replication proteins [BR:
taer03032
]
Prokaryotic type
DNA Topoisomerases
GT409_04895 (topA)
DNA repair and recombination proteins [BR:
taer03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GT409_04895 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
CpsB_CapC
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QHI68812
UniProt:
A0A6P1M457
LinkDB
All DBs
Position
complement(1142812..1145280)
Genome browser
AA seq
822 aa
AA seq
DB search
MAKKLVIVESPAKAKTINKYLGDDYIVKASMGHVRDLPPKKLGVDVDNRFTPEYVNTTGR
AKVITELKAAAKKCDHVYLAPDPDREGEAIAWHLFELLKEFVPEENFSRVTYNEITKSAI
EEAFANPSEMDMNRVNSQQARRVLDRLVGFKVSPLLWKQIKGGVSAGRVQSVALRLVCER
EKEIQEFKPEEYWVLGANVRKQVEPLDPFVVKLARINGEKAEIKGGEQAEKIRAELEAGS
LHVARVIEKTIQRKARAPFITSTIQQAASSVCGFAPSRTMRIAQSLYENGLITYMRTDSF
NIAKSAQEECAAFVASEYGDEYLPKKPNVYKSKGGAQEAHEAIRPTDVSQTPTSVSGLEK
DEAKLYKLVWERFVASQMVPAKIARRTAEVETDSENTYLFRATASEVAFPGYMRASGIES
AADKKKEGEEDDAETKLPPLSEGENLDCIEWTGEQKFTKPPARYSEPSLIRALEENGVGR
PSTYAQTLSTIEKREYVNKEKRQLVPTESGLRVNDFLVSSLDPLFNVKFTAEMEEKLDRV
EEGTVEWTDMMSSFYNQFLEWLEGAKDMAEPEETDGVLKALEQVKEWDEPVKRGRRTYDD
SEIVKSVREKFQEDGKITARQQQMIFRMACKYIEQMPQEIINELKLEKPEAPRTETGKKV
AYLEEVEFDEPRKVGRRTYDDGKFVKSLKQQVQSGKRLSDRQVAALDSLLVKYSKQIPNF
EQVKEDMGLKVKDDGEVTGEISRLMELCKSIETWNPPVKRGNREFNDQDFYSSLSSQFEA
KGTLSPRQVAAMKKMIGRYASQIPTYEAVRESLGLPVPKAAK
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaactggtcattgttgagtcgccggccaaggcgaagacaattaataaatat
ctgggcgacgattatattgtaaaagcatccatggggcatgtgcgcgacctgccaccgaaa
aaactcggtgtggatgtggacaaccggtttactccggaatatgtgaacaccaccggccgc
gccaaggtgattacggagctcaaggccgcggcaaagaaatgtgaccatgtgtatctcgcc
cccgaccccgaccgcgaaggggaagccatcgcatggcatctgttcgagctgctcaaggaa
tttgttccggaagaaaacttcagccgcgtcacttacaacgaaatcaccaaatctgcgatc
gaagaagcctttgccaatccgtcggaaatggacatgaaccgcgttaactcgcagcaggcg
cgccgggtgctcgaccgtttggtcggtttcaaggtcagcccgctgctgtggaagcagatc
aagggcggtgtcagcgccgggcgcgtgcagtccgttgctcttcgcctggtttgcgaacgc
gaaaaagaaattcaggaattcaagccggaagaatactgggtattgggcgccaatgtccgc
aagcaggttgagccgctggatccgttcgtcgtcaaactggcgcgaatcaacggggagaaa
gctgaaatcaaaggcggcgagcaggcagagaagatcagggccgagctggaggccggcagc
cttcatgtcgctcgtgtgatcgaaaaaaccattcagcgtaaagcccgcgcgccgttcatc
acctccaccattcagcaggcggcatccagcgtctgcgggtttgctccttcgcgcacgatg
cgcattgcgcagagcctgtatgaaaacggattgatcacctacatgcgtaccgactcattc
aacattgcgaaaagcgcgcaggaagaatgcgccgcatttgttgcgtccgaatacggagac
gaatatctgccgaaaaagccgaacgtctacaaaagcaaaggcggcgctcaggaggctcat
gaagccatccgcccgaccgatgtctctcagactccgacatccgtcagcggtctcgagaag
gacgaagccaagctctacaaactggtctgggaacggttcgtagccagccagatggtcccg
gcaaaaatcgcccgtcgtacagccgaggttgaaaccgacagcgaaaacacctatctgttc
cgggccaccgcgtccgaagtggccttccccggttatatgcgcgccagcggtatcgaaagc
gccgccgacaaaaagaaagagggcgaagaggacgatgcagaaaccaaactgccgccgctc
agcgaaggtgaaaacctcgactgcatcgaatggaccggcgagcagaaatttaccaagccg
ccggcccgctattctgagccgtcgctcatccgcgctcttgaagagaacggagttggacgt
ccgtccacatacgcccagacgctttcgaccatcgaaaaacgtgaatatgtgaataaagaa
aagcggcagctcgtgccgaccgaatccggccttcgtgtgaacgacttcctcgtcagttcg
ctcgacccgctttttaacgtcaagtttaccgccgaaatggaggaaaagctcgacagggtg
gaagagggaacggtcgaatggaccgatatgatgagctccttctacaaccagttcctcgaa
tggctggaaggcgccaaagatatggccgagccggaggaaaccgatggtgtactcaaagcg
ctcgagcaggtgaaagaatgggacgagcccgtcaaacgcggccgtcgtacctatgacgac
tcggaaatcgtcaaatctgttcgcgaaaaattccaggaagacggcaaaattacagcgcgt
cagcaacagatgattttccgcatggcctgcaaatacattgagcagatgccgcaggaaatc
atcaatgagcttaaactcgagaaaccggaggctccgcgcaccgaaaccggtaaaaaagtg
gcatacctcgaagaagtggagttcgacgagccgcgcaaagtgggtcgccgcacctatgat
gacgggaaatttgtaaaatccctcaagcagcaggttcagagcggcaagcgcctttccgac
cgtcaggtcgccgcgctcgactcgctgctggtgaaatattccaaacagattcccaatttt
gagcaggtcaaagaggacatgggcctcaaggtgaaagatgacggcgaagtcaccggggaa
atctcccgcctgatggaactgtgcaaatcgattgaaacgtggaacccgccggtcaaacgc
ggcaaccgtgaattcaacgatcaggacttctacagctcgctttcatcgcagttcgaagcc
aaaggaacgctttcgccccggcaggttgccgcgatgaaaaaaatgatcggtcgctacgcc
agtcagattccgacctacgaagctgtgcgtgaaagcctcggacttcccgtgccgaaagcg
gcgaaataa
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