Tichowtungia aerotolerans: GT409_06115
Help
Entry
GT409_06115 CDS
T07773
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
taer
Tichowtungia aerotolerans
Pathway
taer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GT409_06115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taer03019
]
GT409_06115
Enzymes [BR:
taer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GT409_06115
Messenger RNA biogenesis [BR:
taer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GT409_06115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Helicase_C_2
ERCC3_RAD25_C
CMS1
Motif
Other DBs
NCBI-ProteinID:
QHI69035
UniProt:
A0A6P1MD59
LinkDB
All DBs
Position
1433857..1435110
Genome browser
AA seq
417 aa
AA seq
DB search
MPFSKLGLLEPILRVVDAVHYKTPTPVQEQAIPLILEGDDLIARAQTGTGKTAAFALPIL
QRLNFVETDPEPGSPLVLVLVPTRELAQQVADTFEEFERHLPRSIGVATVIGGEDILDQL
RRLEQGVDVVVATPGRLLELVRSEKIFFEALRYFVIDEADRLLALGFAEELGQILEVLPI
VRQTLLFSATYPQKVVSLTEQIMQNPVVVNASGDVPTVTNITQRAIEVNRLNRRPLLQHL
VREEAWKHVLVFVSSKRAARNLAVKLKRNGIEADAFHGDLSQDERTFVLNQFKNRSIHVL
IATDIAARGIDIQNLSTVVNYDLPRSPVDYIHRIGRTGRAGAAGVAVSFIDFNDMAHFAL
IEKRTKVRVDREQVPGFELEGEAPKKKKGPPPKKGRRPSKKDKARAAAAKAAERGES
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgccgttttccaaactggggctcctcgagccgattcttcgcgtggtggatgccgttcac
tacaaaacgcccactcccgttcaggagcaggccatcccgctgatcctcgaaggcgacgac
ctgattgcccgggcgcagaccggaaccggcaaaactgccgccttcgcgctgcccattcta
cagcgacttaacttcgttgaaaccgacccggaacccggttcgccgctcgtactggtgctg
gtgccaacccgcgagctcgctcagcaggtcgcggacaccttcgaagaatttgaacggcac
cttccgcgcagcatcggcgttgccaccgtcatcggcggcgaagatattctcgaccagctg
cgcaggctggagcagggtgtcgatgtcgtcgtcgccacgcccggccggctgctcgaactc
gttcgttcggaaaaaatctttttcgaggcgcttcgctatttcgtcatcgacgaagccgac
cgcctgctggcgctcggctttgccgaagagctcgggcagattctggaggttctgccgatc
gtgcgccagaccctgctgttttcggcaacttatccccaaaaggtcgtcagcctcaccgag
cagatcatgcagaatcccgtggtggtgaacgcgtccggcgatgtgccgaccgtaaccaac
atcacgcagcgcgccatcgaagtgaaccgcctcaaccgtcggccgcttctgcagcatctg
gtccgcgaagaggcgtggaagcatgttctcgtatttgtgagcagcaaacgcgcggcacgc
aacctcgccgtaaaactcaaacgtaacgggattgaggccgacgccttccacggcgacctc
agccaggatgagcgcacctttgttctcaatcagtttaaaaaccgcagcatccacgtcttg
atcgccaccgatattgcggcgcgcggaatcgacatccagaacctctccaccgtcgtcaat
tacgacctgccgcgctcacccgtcgactacatccaccgcatcggccgcaccggccgcgcc
ggggccgccggcgtcgccgtcagcttcatcgacttcaacgacatggcgcattttgcgctc
atcgaaaaacggaccaaagtccgcgttgaccgcgaacaggttcccggctttgaactcgaa
ggcgaagccccgaaaaagaaaaagggaccgccgccgaaaaaaggcagacgccccagcaaa
aaagataaagcccgcgcggcggccgccaaagccgcagaacgcggggaatcatga
DBGET
integrated database retrieval system