Tichowtungia aerotolerans: GT409_07305
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Entry
GT409_07305 CDS
T07773
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
taer
Tichowtungia aerotolerans
Pathway
taer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GT409_07305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taer03019
]
GT409_07305
03016 Transfer RNA biogenesis [BR:
taer03016
]
GT409_07305
Enzymes [BR:
taer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GT409_07305
Messenger RNA biogenesis [BR:
taer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GT409_07305
Transfer RNA biogenesis [BR:
taer03016
]
Prokaryotic type
tRNA degradation factors
GT409_07305
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
SPATA25
KH_2
Motif
Other DBs
NCBI-ProteinID:
QHI69265
UniProt:
A0A6P1MDU1
LinkDB
All DBs
Position
1772795..1774915
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AA seq
706 aa
AA seq
DB search
MKDTVKVEFEVGGMPMSFESGVLAQQAAGAVSCQFGGNVVFSAVTAAKEPREGCDFFPLQ
VEYREKFYAAGRFPGGYFKRESRPSEQEILTARVTDRPIRTLFPEGFYCEVQINNMLMAS
DCTRECDFLSINASSAALMLTDLPFGGPIGGVRIARINGEFVVNPTHDDMLKSDLDLTYV
GTADKTMMIEGSAEEISEADFIAAMKTAHEAIQPIIAAQFELRKQLGLPEWKVELPAKDT
TLLDKAREIGADKLSDILIEGDKLKRQNAVNGLKAEIKEQMVELFPEMTEDEYFHAFHEL
EIEVTRENVLTKKMRIGKRGFDKIRELKAQVGILPRVHGSAIFNRGETQALATVTLGPKK
DSQSMDAVTGGPNEKSFMLHYNFPPYSVGECGRLGFTGRREIGHGNLAERSLVPILPKDY
PYAVRVVSEIMGSNGSSSMASACVGTLALMDAGVPIKAPVAGISVGLFTKGEQSDLVIDI
LGTEDHCGDMDFKVVGTREGITSFQVDLKIPGLNWDQVTGAFEMARKGRLEILDFMQTVI
DAPRSEMSEHAPRVEMIKIDPEKIGALIGPGGKVIRGITETYGVQIDVEEDGTVSIFSND
GIAMKGALKEVNGITAEAEIGKLYEGTVKTIRDFGAFVEVLPGKDGLVHISELADFRVGK
VEDICKEGDTMWVKVLDVDRDGKIRLSRKAAMAEMDAEANEEETGE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatacagtaaaagtagagttcgaagtcggcggcatgccgatgagctttgaatcc
ggagttctcgcccagcaggctgctggcgccgtctcctgccagttcggcggcaacgtcgtc
ttctcggcggtcactgccgccaaagagccgcgcgaaggatgcgacttcttcccgcttcag
gttgagtaccgcgaaaaattctatgccgcgggtcgtttccccggtggatacttcaaacgt
gagtcccgtccttccgaacaggaaatcctgaccgcccgcgtaaccgaccgtccgattcgt
acacttttcccggaagggttctactgcgaagtgcagatcaataacatgctgatggcctct
gactgcacccgcgagtgcgacttcctcagcattaacgcctccagtgccgcgcttatgctc
accgacctgccgttcggcggcccgatcggcggcgtgcgcatcgcccgcatcaacggcgaa
ttcgttgtcaacccgacgcacgatgacatgctgaagagtgatctcgacctcacttacgtc
ggtaccgccgacaaaaccatgatgatcgaaggctctgccgaagaaatcagcgaagcagac
ttcattgctgcgatgaaaaccgcgcacgaagccattcagccgattatcgccgctcagttc
gaactgcgcaaacagcttggcctgccggaatggaaagttgaacttcccgccaaagacact
acgctgctcgacaaagcacgcgaaatcggtgccgacaagctcagcgatatcctgatcgaa
ggcgataagctgaaacgtcagaacgcagtcaacggccttaaagctgaaatcaaagaacag
atggttgaactcttcccggaaatgaccgaggacgaatacttccatgctttccacgagctc
gaaattgaagtgacccgcgaaaacgtgctcaccaagaagatgcgcatcggcaaacgcggt
ttcgataaaattcgcgagctgaaagctcaggttggcatcctgccgcgcgttcatggctcc
gccattttcaaccgcggcgaaactcaggcgcttgcaaccgtcaccctcggcccgaaaaaa
gattcgcagtcgatggacgctgtgaccggcggaccgaacgaaaaaagcttcatgctgcat
tacaacttcccgccctacagtgtcggtgagtgtggacgccttgggtttaccggtcgccgc
gaaatcggtcatggtaacctggctgaacgcagtctcgttccgatcctgccgaaagactat
ccctacgcagtgcgcgttgtgtccgaaatcatgggatccaacgggtcttcctccatggcc
tccgcctgtgttggtacgctcgctctcatggacgcgggtgttccgatcaaagcgccggtt
gccggaatctctgtcggccttttcactaaaggggagcagtctgacctcgtgatcgatatt
ctcggaactgaagaccactgcggcgacatggattttaaggttgttggaacccgcgaagga
attacttccttccaggtcgacctcaaaattccgggtctcaactgggaccaggtcaccggc
gctttcgaaatggcccgcaaaggtcgcctcgaaattctcgacttcatgcagaccgttatc
gacgctccgcgctcagagatgagcgaacatgctccgcgcgttgaaatgatcaaaatcgat
ccggaaaagatcggtgccctgatcggtccaggcggcaaagtcatccgcggcattacagaa
acctacggcgtgcagattgacgttgaagaggacggaaccgtcagcatcttcagcaacgac
ggcattgccatgaaaggcgctctcaaagaagtcaacggcatcactgccgaagctgaaatc
ggtaagctctacgaaggaaccgtcaaaaccatccgcgacttcggtgcctttgttgaagtg
ctgccgggtaaagacggcctcgtgcacatttccgaactcgctgacttccgcgtcggtaaa
gtggaagacatctgcaaagagggcgacaccatgtgggtcaaggttctcgatgtggaccgc
gacggtaaaatccgcctcagccgcaaagcggccatggcagagatggacgccgaagccaat
gaagaagagacgggcgaataa
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