Tichowtungia aerotolerans: GT409_08420
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Entry
GT409_08420 CDS
T07773
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
taer
Tichowtungia aerotolerans
Pathway
taer03030
DNA replication
taer03410
Base excision repair
taer03420
Nucleotide excision repair
taer03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
taer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GT409_08420 (polA)
03410 Base excision repair
GT409_08420 (polA)
03420 Nucleotide excision repair
GT409_08420 (polA)
03440 Homologous recombination
GT409_08420 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
taer03032
]
GT409_08420 (polA)
03400 DNA repair and recombination proteins [BR:
taer03400
]
GT409_08420 (polA)
Enzymes [BR:
taer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GT409_08420 (polA)
DNA replication proteins [BR:
taer03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GT409_08420 (polA)
DNA repair and recombination proteins [BR:
taer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GT409_08420 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GT409_08420 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
DNA_pol_lambd_f
HHH
RecR_HhH
IMS_HHH
RNase_H_2
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-ProteinID:
QHI69477
UniProt:
A0A6P1M6J5
LinkDB
All DBs
Position
complement(2065483..2068278)
Genome browser
AA seq
931 aa
AA seq
DB search
MAKKLFLLDGMALVYRSYFAFMRNPMINSKGRNVSAVFGFLNALLEIIEKHEPTHIAVAF
DVSGPTFRHDEYPEYKAQREETPEEIRAAVPAIREFLEAFNIPVLTKQGYEADDIIGTLA
RRAEQEGFDTTMVTPDKDYAQLVDDHTFMMKPAKKGADPEVLGVEQVLEQWGIEKVDQVI
DILGMAGDTADNIPGIPGIGPKTAQKLIAQYGSLENLLEHTDELKGKQKEKVEENKERAR
LCKRLVTIHTNVPIDETPDSLVRNELDEEKLTALFAEFEFTAFSKRLFGKTPPPAPGAGY
AAPADTGGQGDLFAFAAANTPAAPAKEEPVYKTIDDVKHRYHLVSTAEDRAALAKKMGEA
SSFCFDTETTGLDPRMDRLIGMSFAIQPHEAWYVTLPPDDEETRKALEPFKAVFGNEEIE
KTGHNLKFDIAMLREAGVEVKGPLFDTMLAHYLLDPDQRHGLDRLAGSFLQYAPVSITTL
IGEKKKEQLHMTDVPLDKLSDYACEDADVTLQLRYVLEPLLEKQHLRKSLDTIECPLIPV
LVEMEANGIALDTAALEEISGRLAGEIENCEKHIYELAGHEFNLNSPKQLGEVLFDEMNL
VEKPKKTKTGQYKTNEEELQKLAGDHEIVSTILDYRAATKLKSTYVDALPGFICEKTGRI
HTSFNQAVTTTGRLASSDPNIQNIPVRTEQGQEIRRAFVAASNDFTLLAADYSQIELRIM
AHLSGDEHMKQAFIDGADIHTATAARVFGVAPEEVTKEQRRRSKMVNFGIIYGISAFGLS
QRLRIPRKEAAEIIENYFAQYPAVKQFMDSLIDGARDKGYVETITGRRRHIRDINSNNGT
VRSAAERYAINAPIQGSAADLIKIAMIRIEKMLRGKRSKLLLQVHDELVFDLHNDEQDLI
PEIQKLMQEALPLSVPLIVDCGTGDNWLQAH
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaaactttttcttctcgacgggatggcgctggtgtaccgctcctacttcgcc
ttcatgcgcaacccgatgatcaactccaaaggacgcaatgtttcggcggtttttggattt
ctgaatgccctgctggaaatcatcgagaaacatgaaccaactcatatcgcagtggctttc
gacgtctccggtccaacctttcgccacgacgagtatccggagtacaaagctcagcgcgaa
gagacgccggaggaaatccgcgccgccgtcccggcaatcagggaatttcttgaagcgttc
aatatccccgtactgaccaaacagggttatgaagctgacgacatcatcggcaccctcgcc
cgccgcgccgaacaggaaggattcgacacaaccatggtcacgccggacaaggactacgcc
cagctcgtcgacgaccacacgtttatgatgaagcccgccaagaaaggcgctgatcccgaa
gtgctcggcgtggaacaggtgctcgagcagtggggcatcgaaaaagtcgatcaggtcatc
gatattctcggcatggcgggcgacaccgccgacaatattcccggcattcccggaatcggc
cccaaaacggcgcaaaagctgatcgcgcagtacggctcactggaaaacctgctcgaacat
accgacgagctgaagggcaagcagaaggagaaggtcgaagaaaacaaagaacgcgcccgg
ctctgcaaacggctggtcaccattcacaccaacgtaccgattgacgaaacgccggacagc
ctcgtccgcaacgaattggatgaagaaaaactgaccgccctcttcgcggaatttgaattc
acagccttttccaaacggctgttcggcaaaaccccgccgcccgctccgggcgcgggctac
gccgcccccgccgacaccggtggccagggcgacctgttcgccttcgcggcagccaacacg
cctgccgcaccggcaaaagaggagccggtctacaaaaccatcgacgatgtcaaacatcgc
taccatttggtcagcacggccgaagaccgggccgcgttagcaaaaaaaatgggtgaagct
tcaagcttctgttttgatacggaaacaaccggactcgatccgcgtatggaccggctgatt
ggaatgtcgttcgccatccagcctcacgaagcgtggtatgtgacgctgccgccggacgac
gaagaaacccgcaaagcgcttgagccgttcaaagcggtctttggaaacgaggaaatcgaa
aagaccgggcacaatctcaaattcgacatcgccatgctgcgcgaagcgggtgttgaggtg
aaaggcccgctgttcgacaccatgctcgcgcactacctgctcgatcccgaccagaggcac
gggctggaccgcctcgccggaagttttctgcagtacgcccccgtgtcaatcaccacgttg
atcggggagaagaaaaaagaacagctccatatgaccgacgtgccgctcgacaaactgagc
gactacgcctgcgaagatgcagacgtcaccctgcagctgcgttacgttctggaaccgctg
ctcgaaaaacagcatttaaggaagtccctcgacaccatcgagtgcccgctgattccggta
ctggtcgaaatggaagccaacggcatcgcgctcgacaccgccgcgctcgaagaaatctcc
ggacggctggccggagaaattgaaaactgcgaaaaacacatctatgagctggcggggcac
gagttcaacctcaactctcccaagcagctcggcgaagtgctgttcgacgaaatgaacctg
gttgaaaaaccgaaaaagacaaaaaccgggcagtacaaaaccaacgaagaggaactgcag
aaactggccggcgatcacgaaattgtctcgaccatcctcgactatcgcgccgccaccaaa
ctcaagagcacctacgtcgacgccctgcccggattcatctgcgaaaaaaccggccgcatc
cacacctcgttcaatcaggcggtcaccaccaccggacgccttgcctcgagcgaccccaat
attcagaacattcccgtgcgcaccgaacagggacaggaaatccgccgcgcctttgtcgcg
gcctcaaatgacttcacgctgctggccgccgactactcgcagattgagctgcgcatcatg
gcgcacctcagcggcgatgaacacatgaagcaggccttcatcgacggcgcggacattcac
accgccaccgccgcgcgcgtcttcggcgtcgcgcccgaagaggtcaccaaggagcagcgc
cgccgctccaaaatggtcaacttcggcatcatctacggcatctccgccttcggtctctcg
cagcgcctgcgcatcccgcgcaaagaagccgctgaaatcatcgaaaactatttcgcgcag
tacccggcggttaaacagttcatggacagcctcatcgacggagccagggacaaaggctac
gtcgaaaccatcaccggacgccgtcgccacatccgcgacatcaactcaaacaacggcacc
gtgcgctccgccgccgagcgctacgccatcaacgcccccatccagggctccgctgccgac
ctcatcaaaatcgccatgatccgcattgagaaaatgctgcgcggcaaaagaagcaagctt
ctcttacaagtacatgacgagctggtgtttgatttgcacaacgacgaacaggatttaatc
cccgaaatccagaaacttatgcaggaggccctgcccttgagcgtccccctcatcgtcgac
tgcggaaccggagacaactggctgcaggcgcattag
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