Tichowtungia aerotolerans: GT409_08930
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Entry
GT409_08930 CDS
T07773
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
taer
Tichowtungia aerotolerans
Pathway
taer03030
DNA replication
taer03430
Mismatch repair
taer03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
taer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GT409_08930 (dnaE)
03430 Mismatch repair
GT409_08930 (dnaE)
03440 Homologous recombination
GT409_08930 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
taer03032
]
GT409_08930 (dnaE)
03400 DNA repair and recombination proteins [BR:
taer03400
]
GT409_08930 (dnaE)
Enzymes [BR:
taer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GT409_08930 (dnaE)
DNA replication proteins [BR:
taer03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GT409_08930 (dnaE)
DNA repair and recombination proteins [BR:
taer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GT409_08930 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Phage_tail_terminator_3
Motif
Other DBs
NCBI-ProteinID:
QHI69575
UniProt:
A0A6P1MER2
LinkDB
All DBs
Position
complement(2165743..2169300)
Genome browser
AA seq
1185 aa
AA seq
DB search
MKTVPFCHLHFHTQYSLLDSACKVGEIMETAKALGQEYVAMTDHGNLYGAVEFYKKAYSA
GIKPIIGCEVYVARNGMDEKSSQADNMHLVLLAENNKGYENLMKLVSKAHLEGFYYKPRI
DKKLLREYSGGIIGLSACLKGEVTEAAAAGDVDKAVALAHEYSEILGPNNFYLELQDHGM
PEQKEGNRHMLEVARITGLPLVVTNDVHYIKQTDHEAHDVLICLQQGHLLTDENRMRYPG
NQFYMKSGAEMQQLFPDQPEALANTIEIAKRCNVEFEFDLPAERLHFPAFFPLPEGVSKE
DHLMEIGKRELEKLYNLKDFDHPEDELGERVKKQYEYEVGIIKQTNYVNYFLVVADFIRW
AKENDIPVGPGRGSGAGSILAYALGITAIDPLKYNLIFERFLNPDRVSPPDFDIDFCPTK
RQAVIQYVREKYGEDCVAQIITFGTLGAKTLMRDIGRVLDLPLSECDKVAKLIPDMTKNL
QTAQKDSPDFALACRTDPTARAIMKYAPRLEGLPRHTGMHAAGVVIGEKPLIDIIPLTRE
RKEGMTVVQFEKGPTEEIGLLKMDFLGLKNLTIIQEAIDHIEANHGIKIDPMELPLDDEK
TFDLFCRGDTAGVFQLESPGMRDTLRQMNPDCFEDIIAVLALYRPGPMQFIPTYNARKHG
KEKVKYDHPILEPILKETNGIIVYQEQIQQAARDLAGFSLGEGDILRRAMGKKKKEVMDE
QRSYFVEGCKKTNSIEEKLANRIFDNIAKFAEYGFNKSHSTAYGFVSFQTAYLKAHYPEE
FMAALLSAEMGNPDKLAGVLSEVKEMGIEIRPPSVNESIARFRPTKGAIHFGMAGIKGVG
GGAVDALVSERDANGPYEGLIDFCSRVDSQALNRKALENLIKCGAFDFTGIHRSRLFEGI
GTALARAAEAAKDRASGQGNMFDMLGGGETEETVGDEELPDAAPWHENEMLSTEKELIGF
YVSGHPLAAHEWTLKTFALQRIGNLEEYEERLSKGEKEIYVRLGGLVDQYRKMFTKKDPP
RPYARFVIEGLDGAINAVVWPDDFQNLEPFLDDGKAIMVGAKIALDFRDSLEVQVSEIIP
LTDAGLRYTKKVSIHLTEASVTEERLKTIQEIAKRNPGLTPLSICILLDSGEKVFVKAHR
DYYVEATQQLGHELEQLLGEDCVKIVSRQNPLLRPPARRKWQKRG
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgttccattctgccatcttcattttcacacgcaatacagcctgctcgacagc
gcctgcaaagtcggcgagatcatggagaccgccaaggctctggggcaggagtatgtggcc
atgaccgaccacgggaacctctacggcgcggtcgagttctataaaaaagcctattccgca
ggcatcaaacccattatcggctgcgaagtgtatgtcgcccgcaacggtatggacgaaaaa
tcgtctcaggccgataacatgcacctggtgctgctggccgaaaataacaagggctacgag
aacctgatgaagctggtctcaaaagctcacctcgaaggattctactataaaccgcgcatc
gacaaaaagctgctgcgcgagtacagcggcggcatcatcggactctccgcctgcctgaag
ggtgaagtcactgaagccgcagcggcgggagacgtcgacaaagctgtcgctctggcccat
gaatactcagagattctcggaccgaataatttttacctcgaactgcaggatcacggcatg
ccggagcagaaagagggaaacaggcatatgcttgaggtggcgagaatcaccggacttccg
ctggtggtcaccaacgatgtccactatatcaaacagaccgaccatgaagcgcacgatgtg
ctgatctgcctgcagcaggggcacctgctgaccgacgaaaaccgaatgcgctaccccggc
aaccagttctatatgaagagcggcgccgaaatgcagcagcttttccccgaccagccggaa
gcgctcgccaacaccatcgagatcgccaagcgctgcaatgtggaatttgagttcgacctg
cccgccgaacggctccacttcccggcattcttccctcttcccgaaggcgtttccaaagaa
gaccacctaatggaaatcgggaaacgcgaactggaaaaactttataacctgaaagatttc
gatcacccggaagatgagctcggcgaacgagtgaaaaaacagtatgagtacgaagtcggc
atcatcaagcagaccaactatgtcaactacttcctcgtggtggccgacttcattcgctgg
gccaaagaaaacgacatcccggtcggtccggggcgcggatcgggggctggatctattctg
gcctacgcgctgggaatcacggccatcgatccgctgaagtacaatctgatttttgaacga
ttcctcaacccggaccgcgtctcaccccccgacttcgatatcgacttctgccccaccaaa
cggcaggccgttatccagtacgtgcgcgaaaaatacggcgaggactgtgtagcacagatt
atcacttttggaacactcggcgcaaaaacgctgatgcgggatatcggacgcgtactcgac
ctgccgctctctgagtgcgacaaggtcgccaagctcattccggacatgaccaaaaacctg
cagaccgcgcagaaggacagtccggactttgccctcgcctgccgaacggacccaaccgcg
cgcgcgatcatgaaatacgcgccgagactcgaaggcctgccgcgccatacggggatgcac
gccgccggagtggtgatcggcgaaaaaccgctgatcgacatcatcccgctcacacgcgag
cgcaaggagggcatgacggttgtccagtttgaaaaagggccgacggaagaaatcggcctg
ctcaagatggacttcctcggcctcaaaaacctgacgatcattcaggaagccatcgatcat
attgaagccaaccacggcattaaaatcgatccgatggaactcccgctcgatgacgaaaaa
acgttcgatctgttctgccgaggggatacggccggcgtgttccagctggaaagtcccgga
atgcgcgataccctgcgacagatgaatcccgactgttttgaggatatcatcgcggtgctg
gcgctttatcgtccgggccccatgcagtttatcccgacctacaacgcgcgtaaacacggc
aaggaaaaggttaaatacgaccatccgattctcgagccgatcctgaaagaaaccaatggg
atcattgtttatcaggagcagatccagcaggccgcgcgcgacctcgcgggcttttcgctg
ggcgaaggggacatccttcgccgcgccatgggtaaaaagaaaaaagaggtgatggacgag
cagcgcagctatttcgttgaaggctgcaaaaaaaccaacagtatagaagaaaagctcgcc
aacagaatctttgacaacatcgccaaatttgcggaatacggatttaacaaatcgcattca
accgcctacggatttgtttcttttcagactgcttatctcaaagcgcattaccccgaagaa
ttcatggccgccctgctctcggcagaaatgggcaatcccgacaaactcgcgggggttctg
tccgaagtgaaggaaatgggcattgaaatccgccccccgagcgtcaacgaatccatcgcc
cgcttccgcccgaccaagggagccattcatttcggcatggccggaatcaaaggtgtcgga
ggcggcgctgtcgacgccctggtatccgagcgcgatgccaacggcccttatgaaggactg
atcgatttctgcagccgggtcgactcgcaggcactgaaccgaaaagcgctcgaaaacctg
atcaaatgcggagcgttcgattttaccggcatccaccgctcacggctgttcgaaggcatc
gggaccgctcttgcccgtgcagccgaagccgctaaagaccgcgccagcggacagggaaac
atgtttgatatgctgggcggcggagaaacagaagaaaccgtcggggatgaagaacttccc
gatgccgcgccatggcacgaaaacgaaatgctctccaccgaaaaagaactgatcggattc
tatgtatccggccatccgctggccgcacatgaatggacgctcaagacttttgccctgcag
cgcatcggaaacctcgaagaatacgaagagcggctgagcaaaggagaaaaagagatttat
gtccgcctcggcggactcgtggaccaataccggaaaatgttcaccaaaaaggatccgccg
cgaccatatgcccgcttcgtcatcgaaggacttgacggcgccatcaatgcggtggtctgg
ccggatgatttccaaaatctggaaccgtttctggatgatgggaaagccatcatggtcggg
gcaaaaattgcgctcgatttccgtgattcactcgaagttcaggtgtcggaaatcatcccg
ctgactgatgccgggctgcgctacactaaaaaagtaagtatccatctaaccgaagcctct
gtaacagaagagcgcctgaaaaccattcaggaaatcgccaaacgaaaccccggcctcacg
ccgctctccatctgcatcctgctcgacagcggcgaaaaagttttcgtcaaagcgcatcga
gactactacgtcgaggccacccagcagcttggacacgaacttgaacaactgctcggcgag
gattgcgtaaaaatcgtctcccgtcagaatccgctgcttcgcccacccgcgcggcgcaaa
tggcagaaacgcggatga
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