Triticum aestivum (bread wheat): 101669840
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Entry
101669840 CDS
T07757
Name
(RefSeq) polyadenylate-binding protein 2
KO
K13126
polyadenylate-binding protein
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03015
mRNA surveillance pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101669840
09123 Folding, sorting and degradation
03018 RNA degradation
101669840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
101669840
03041 Spliceosome [BR:
taes03041
]
101669840
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101669840
mRNA cycle factors
Stress granule specific factors
101669840
Spliceosome [BR:
taes03041
]
Complex C
Other components
Complex C specific factors
101669840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
RRM_5
RRM_Nup35
RBD_AKAP-17A
RRM_7
RRM_8
TEX47
Motif
Other DBs
NCBI-GeneID:
101669840
NCBI-ProteinID:
XP_044325157
LinkDB
All DBs
Position
2B:complement(549046367..549051498)
Genome browser
AA seq
665 aa
AA seq
DB search
MAAQVAVANGGGAGPAAAAVAVVPAPAPAAPGGVTQPLPTTSLYVGDLEANVTDSQLYEL
FSQAGQVVSVRVCRDVTSRRSLGYAYVNYSSPMDAARAMEALNFAPLNNKPIRVMYSNRD
PSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGFVQYEKEE
SAQSAMKSLNGMLINDKPVYVGPFLRKQERDNSFDKAKFNNVFVKNLSESTTKDDLVKVF
SEYGTITSAVVMIGMDGKSRCFGFVNFESPDDAARAVEELNGKKINDKEWYVGRAQKKSE
REMDLKRRFEQSMKDAADKYQGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNG
VSKGSGFVSFSTREEASQALTEMNGKMISGKPLYVAFAQRKEDRKAMLQAQFSQMRPVPM
TPSMTPRLPMYPPMPTLGQQLFYGQAPPAMMPPQPGYGFQQQLVPGMRPGGGAHMPNYFV
PVVQPGQQGPRPGIRRNGPGSAQGQQTPQPFQQQMVPRGRVYRYPPGPRHMPEVQQMPGV
GVGGMVQPYDMGSFPVRDAGVSPAPPIGTLTSALANATPEQQRTILGESLYPLVEKLEHQ
QAAKVTGMLLEMDQTEVLHLLESPEALKSKVAEAMDVLRNVAQQQNPNAPTSQLAGLTLS
DGIIS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcaggtggcggtggcgaacggcggcggcgcaggcccggcggcggccgcggtg
gcggtggtccccgcgcccgcgcccgcggcgcccggaggggtcacgcagccgctcccgacc
acgtcgctctacgtcggcgacctcgaggccaacgtcaccgactcgcagctctacgagctc
ttcagccaggccggccaggtcgtctccgtccgcgtctgcagggacgtcacctcgcgccgc
tccctcggctacgcctacgtcaactacagcagccccatggatgctgcaagagcaatggaa
gcgctgaactttgctccactgaacaacaagcccattcgagtaatgtactcgaaccgtgac
ccaagcagccgcagaagcggatctgcaaatatctttatcaagaaccttgacaagacaatt
gacaacaaaactcttcatgacaccttctctgcatttggtgcaattctctcatgtaaggtt
gccatggatgatattggccaatccaaaggctttggatttgttcagtatgagaaagaagag
tctgcacagtctgcaatgaaaagcctaaatggcatgcttatcaacgataagcctgtctat
gttggaccttttctccgcaagcaagagagagataattcttttgacaaggcaaaatttaac
aatgtctttgtgaagaatttatctgagtctactacaaaagatgatctagtcaaagtattc
agtgagtatggaactattacaagtgctgttgtaatgattggcatggatggtaaatccagg
tgtttcggctttgtcaattttgagagcccagatgatgctgctcgtgctgttgaggaactt
aatggaaagaaaatcaatgacaaagagtggtatgttggtagagctcagaagaagtctgaa
agggagatggacttgaagagaaggtttgagcaaagcatgaaagatgcagctgataaatat
caaggacagaacttgtacttgaagaatttggatgatggcattacagatgatcagctacgt
gagctgttctccaactttggcaaaattacctcttgcaagataatgcgtgatcaaaatggt
gttagcaagggctctggctttgtttcattttctacccgcgaggaagcatctcaggctctc
actgaaatgaatggcaaaatgatatctggaaagccattatatgttgcatttgcacagcgt
aaagaagatagaaaagcaatgttacaggctcaattctctcagatgcgccctgtaccaatg
accccttctatgactccccgactcccaatgtaccctcctatgcctactcttgggcagcaa
ctcttctatgggcaagctccacctgctatgatgccccctcagcctgggtacggtttccag
cagcagcttgttccaggaatgaggcctgggggtggtgcccatatgccaaattactttgtt
ccagttgtccaaccaggtcagcagggtccgcgcccaggtatcaggcgcaatggtcctggg
tctgctcagggacagcaaactcctcagccatttcagcaacagatggttccaaggggacgt
gtgtaccggtacccacctggacctcgtcacatgcctgaggttcaacagatgcctggggtt
ggtgttggaggtatggttcagccatatgacatgggaagcttccctgtgcgagatgctggt
gtgtcacctgctcctccaattggaactctcacatctgcccttgcaaatgctactccagag
caacaaagaacgatacttggcgaaagcctctatccacttgttgagaagcttgaacaccaa
caagctgccaaggtgacgggcatgcttctggagatggaccagacggaggtgctgcatctg
ctcgagtctccagaggctctcaagtccaaggttgccgaggcgatggatgttctccgcaac
gtggcccagcagcaaaacccgaatgcccctaccagccagctcgcgggtctaaccttgagc
gacggcattatctcttag
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