Triticum aestivum (bread wheat): 123039908
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Entry
123039908 CDS
T07757
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123039908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123039908
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123039908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
123039908
NCBI-ProteinID:
XP_044318821
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Position
2B:9689297..9694657
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AA seq
313 aa
AA seq
DB search
MSLPSSPSLVRGGKVGTEVVQASVDQKMTSMEYLVLNLCDPTLRERSLAELSKEREMFPD
LAPLLWYSFGTIAALVQEILRIYPALSPPTLTSAASTRVCNALTLFQCVASRPETRSSFI
EADIPLYLYPFLRTVDKAQAFEQLRLATLGVIGALVKDENTKATEYLLKCETIPLCLNIM
EIGNEPSKTVSTFILLKVLRNELGLHRCCDTRGPFYDIAFALQKRVNSPDERPSARLLRC
IIQCYLRLLDHPRGHAVLKTWFPSVLQTGTFNDYLTKDPSMQECLQQLLAKMEAGSPIRS
LHFLRCSDNAIIP
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgccttcatctccttctttggtgagaggcggaaaagttggcaccgaggtggta
caagcatcggtggaccaaaagatgacatcgatggagtatctggtgctcaacctttgcgac
cctacgctacgcgagagatccctcgcggagctctctaaggagagggagatgtttccggat
ctggcccctttgttgtggtactcattcggcacaattgccgcgttggtccaggagattcta
agaatctaccctgcgctttcgcctccaactttaacgtctgctgcatcaacacgggtttgc
aacgcactcacactttttcagtgcgttgcatcacgccctgagaccagaagctctttcata
gaagctgatattccattgtacctgtacccattcttgcgtaccgtagacaaggcccaagct
tttgagcaattgcggctcgccactttgggtgtcattggtgctctggtaaaggatgagaat
actaaagctactgagtatttgctcaaatgtgaaaccattcctttgtgcttgaatatcatg
gagataggcaatgagccttcaaaaaccgtgtccactttcattctcctaaaggttctgcga
aacgaacttggtctgcatcgctgttgtgacactcgcggtcctttctatgatattgctttt
gctttacaaaagagggttaactcaccagacgaacggccttcggcaaggttgctgaggtgc
attatccagtgttaccttaggctattagatcatcctaggggccatgcggtgttaaaaaca
tggtttcccagcgtgctacagaccgggacattcaatgactatctcacgaaggatccttca
atgcaagagtgtctgcagcaactgttggctaagatggaggctgggagtcccatcaggtcg
ctccattttctccgctgcagtgacaacgctatcataccatga
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