Triticum aestivum (bread wheat): 123043304
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Entry
123043304 CDS
T07757
Name
(RefSeq) DNA mismatch repair protein MSH2-like isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
123043304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
taes03400
]
123043304
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
123043304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
ATG17_like
Motif
Other DBs
NCBI-GeneID:
123043304
NCBI-ProteinID:
XP_044321658
UniProt:
A0A3B5XX82
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Position
1A:complement(208903961..208916428)
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AA seq
959 aa
AA seq
DB search
MDSEDCLPEGGKLPELKPDARQAQGFISFFKKLPKDPRAIRFFDRRDYYTAHGENATFIA
KTYYHTMTALRQLGGNSDGISSVSVSRAMFETIARNLLLDRTDHTLELYEGSGSSWRLTK
SGTPGNIGSFEDILFANNDMQYSPVTVALFPVFREGQLYVALSFVDMTNRKLGLAEFPED
SRFTNVESALVELGCKECLLPADFEKSIDLQPLQDAISNCSILLTERKKAEFKSRDLVQD
LGRIIRGSVEPVRDLLSQFDYALGTLGALVSYAELLADDTNYGNYTIEKFNLDRYMRLDS
AVVRALNIVEGKTDVNKNFSLFGLMNRTCTAGMGKRLLNKWLKQPLIDVNEINNRLDMVQ
AFAEDPELRQGLRQQLKRISDIDRLTHALRKKSANLQPVVKLYQSCSRIPYIKGVLQQYN
GQFSTSVMTRFLSSLEEWLTENRYGRFANLVETAIDLGQVDNGEYRISPLYSSDLAVLKD
ELSEVENHINNLHMHTATDLDLSVDKQLKLEKGPFGHVFRISKKDEQKVRKKLTTNYIII
ETRKDGVKFTSAKLKKLGDQYQSLLGDYTSCQKKIVDNVVQVSCTFSEVFENFAAIISEL
DVLQSFADLAISCPVPYVRPDITTSEEGDIILQGSRHPCVEAQDGVNFIPNDCTLARGKS
WFQIITGPNMGGKSTFIRQVGVNVLMAQVGSFVPCDQASISVRDCIFARVGAGDCQLRGV
STFMQEMLETASILKGASEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVTRAPTLFAT
HFHELTALANKNGDQHQHVPDLGIANYHVGAHIDPSSRKLTMLYKVFIMIMSLFSSGSCV
QKVEPGSCDQSFGIHVAEFANFPEAVIALAKSKAEELEDFTSAPNLSGEPSDEVGSKRKR
VFSPDDVTRGAARARLLLEDFSALPLDEVDGSKATEMVAKLKSDFEKDAASNPWLQQFL
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgaagactgcttgccggagggggggaagctcccggagctcaagccagatgcg
aggcaagcccagggtttcatctccttcttcaagaagttgccgaaggatcctcgggccatt
cgtttctttgatcgccgggattattacactgctcatggtgagaatgcaacctttattgcg
aagacatactatcacacaatgactgccttaaggcagctgggcggtaactctgatggaatc
tcaagtgtcagtgttagcagggctatgtttgagaccattgcacgcaaccttttgttagat
aggacggaccatacactggagctctatgagggaagtgggtcaagttggaggttaacaaaa
tctggaacacctggaaacataggcagttttgaagatattctgtttgcaaacaatgacatg
caatattccccggttactgttgcattgtttcctgtcttccgtgaaggtcagctatatgta
gcgcttagttttgtggatatgacgaaccggaagcttgggttggctgagttccctgaagat
agtcgatttacaaatgtggaatcagcccttgttgaattaggttgcaaggagtgtcttctt
ccagcagattttgagaaatcaatagatttgcagcctcttcaggatgctattagcaattgc
agcattctactgactgaaagaaagaaggctgaatttaaatctagagatcttgtgcaggat
cttggtagaataatcaggggttctgtcgagccagttcgtgatctcctatctcagtttgac
tatgctttgggtacccttggagctctagtatcatatgctgagttgctagcagatgacact
aattatggaaattacacgattgagaaattcaatttggaccgctacatgcgacttgattct
gccgtggtgcgagcattgaatattgttgaaggaaaaactgatgtaaacaagaattttagt
ttgtttggtttgatgaacagaacctgcactgctgggatgggaaagcgactgcttaacaaa
tggctgaaacaacctttgatagatgtaaacgaaatcaataacagattagatatggttcag
gctttcgcagaagatccggagcttcgtcagggtcttaggcaacaacttaaaaggatatct
gatattgatcgcctaacacatgctctccgtaagaaatcagccaacctgcagcctgttgtt
aagctctaccagtcctgctctagaatcccatacatcaagggtgttcttcagcaatacaat
ggccaattttctacatctgtaatgacaaggttccttagctctttagaagagtggctgaca
gagaatcgatatggtaggtttgctaatcttgttgagacagccattgacctcggtcaagta
gacaatggcgagtacaggatatctcccctatattcttctgatttggctgtgctgaaggat
gagctttctgaagtcgaaaatcacataaacaatttgcacatgcatacagccactgatctg
gatctttctgttgataagcaattgaagctagaaaaaggcccatttggacatgtgttcaga
atctcaaagaaagatgaacagaaagtcaggaaaaagctcacgaccaattacattatcata
gaaactcgtaaagatggtgtgaagtttacaagcgccaagcttaaaaagctaggtgaccaa
taccagtcactgcttggtgattacacaagttgccagaaaaagattgttgataatgtagtg
caagtttcatgcaccttctcagaggtatttgagaattttgctgcaattatatccgagttg
gatgttttacagagttttgctgatttggcaataagttgcccagttccttatgtaagacca
gacatcacaacatcagaggaaggagatattattctacaaggtagtcggcatccttgtgtg
gaggcccaagatggtgttaacttcataccaaatgattgcactttggcgaggggaaaaagt
tggtttcaaatcatcactgggccaaacatgggtggaaaatccacttttatacgtcaggtt
ggcgtaaatgtcttgatggcacaagttggttcctttgttccttgtgatcaggcaagcatt
agtgtgagagattgtatttttgctcgtgttggtgctggtgattgccaactccgtggtgtt
tcaacctttatgcaagagatgcttgaaacagcatccattttgaaaggtgcatctgagaaa
tctctcataattatcgatgagttgggacgaggaacttccacatatgatggatttggtctt
gcatgggctatctgtgagcatcttgtggaagtgactagggcgcctacattgtttgcaact
cattttcatgaattaactgcattagcaaataaaaatggtgatcagcaccaacatgttcca
gatttgggaattgcaaattatcatgtgggtgcacatatagacccatcaagtcggaagttg
actatgctttataaggtcttcatcatgataatgtccctattttccagcggtagttgtgtc
caaaaggttgaacctggttcctgcgaccaaagttttggtatccatgttgcggaatttgct
aattttccagaagctgtcattgctcttgcaaaaagcaaagctgaagagttagaagacttt
accagtgcacctaacttgagtggtgaacccagtgacgaggttggatcgaaacgcaagagg
gtgtttagcccagatgatgtgacgaggggagctgctcgggctcgccttttgttggaggat
ttttctgcattgcctctagatgaggtggatgggagcaaggctacggagatggtggccaaa
ctgaaatcagacttcgagaaagatgcagccagtaatccctggctgcagcagttcctctga
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