Triticum aestivum (bread wheat): 123043600
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Entry
123043600 CDS
T07757
Name
(RefSeq) protein RRP6-like 2
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123043600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123043600
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
123043600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
PMC2NT
Motif
Other DBs
NCBI-GeneID:
123043600
NCBI-ProteinID:
XP_044322038
UniProt:
A0A3B5XXC1
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All DBs
Position
1A:complement(221844606..221850744)
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AA seq
910 aa
AA seq
DB search
MEADEAPHPPPPWKQNKSAVAVEASSGSLASAAARLSARSRAIPPARDFHFYNNFPSFKS
PVAAAAARAESSLGVLGASTLLPKQQQQQPPFPTEDLDDAYDWLVARNDDLLEMFAASAD
EFKALREKEEAQGRKVAAEEMAGDGFQVVYGKKKKKVGMGEEGVGRSEAFGSSGSVRMAT
MDRAAASGPKPKVPFHIPTIPRPQDVHRIVVDNTSKPFDHTFLERSDDGARAIHPLEKLP
MEQLFDRRVPESEPLKPPALDDTPFTFVEDRKTLEVLVTKLKSATEFAVDLEHNHYRSFQ
GLTCLMQISTRTEDFIVDTLKLRNCLGENLREVFQDPTKKKVMHGAGRDIIWLQRDFGIY
VCNLFDTGQASRILQMDRNSLEHLLQYFCGVTANKEYQSADWRLRPLPDEMTKYAREDTH
YLLYIYDLMRLRLVNESSGDDLLLEVCKRSNGICLQLYEKELLTDSSYLYIHGLKENDLS
ARQLAVLAGLYQWRDGVARAEDESTGYILPNKTLLEIAKQMPVTTGRLKRTVKSKNKFLE
HYLGHVITIIRNAVANADAFESIAEQLKKGRLEELMAAEAKDGSEDSEMIPAVDADSNES
NLQLIAEPDVAPTVITNVHTASFCTGNVTSGASLGNLQLDNITPETKSFGALPGATGQAD
TVIPSNGGGQQQVIKATVQVSKRPTAFGALLGKPSTARRPNLFPGFSSDQNKSKVEKIKS
SVVLPFHHFSGGANPPATSPPVAKSSEHEAEIMCEDPVSRMEEVIQLDTGTDDPENGNAD
GQSDCKPGDTDVSSSPPEPSSGIEQRCRSLDESRDLQQKHQAPEELEFNDQLKAFDYAEA
RKNTSFGEVRSERRKDNAVASAINVDSGDKRKSLKQTPGAGGGEEDEGNFQNPRRRQAFP
PSGNRSATYH
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggacgaggcccctcacccaccgccgccgtggaagcagaacaagtcggccgtg
gccgtcgaggcctcgtcgggctcgctcgcctccgccgccgcgcgcttgtcagcccgctcc
cgcgcgatccctccggcccgcgacttccatttctacaacaacttcccctccttcaagtcc
cccgtcgccgccgccgccgccagggccgagtcctccctgggcgtcctcggcgcctccacg
ctcctccccaagcagcagcagcagcagccgcctttccccacggaggacctcgacgacgcc
tacgactggctcgtcgcccgcaatgacgacctgctcgagatgtttgccgcctccgcggac
gagttcaaggcgctgcgggagaaggaggaggcccagggacggaaagtcgcggcagaagag
atggcgggggacgggttccaggttgtctacggcaagaagaagaagaaggtgggtatggga
gaggaaggagttggcagaagtgaggcctttggatcttctggttcggtgaggatggccacc
atggatagggctgcagcatcagggccaaagccgaaggtgcccttccacatccccaccatc
ccacgcccgcaggacgtgcaccgcattgtggtggacaacacgagcaagccattcgaccat
accttccttgagcgcagcgatgacggtgcccgtgccatacacccactggaaaaactcccc
atggagcaactatttgacaggcgtgttcctgaaagtgagccattaaagccacctgcttta
gatgacaccccttttacatttgttgaagaccggaaaaccttggaagtgttggtgacaaag
ctgaagagtgcaactgagtttgctgttgatttggaacacaaccactataggtcttttcag
ggtctcacctgcctgatgcagatttcaactagaaccgaggactttattgtagacactctt
aagctccgcaattgtcttggtgagaacttgagagaagtttttcaagatccaactaagaag
aaggtaatgcatggggcaggtcgtgatataatatggcttcaaagagactttggaatatac
gtgtgcaaccttttcgacacagggcaggcttcaagaatcttacaaatggaccgcaacagc
ctggagcatcttctgcaatatttctgtggagtgacagcaaacaaagaatatcagagtgca
gattggaggctgaggccacttcctgatgaaatgaccaagtatgctagagaagatacacac
tatctgctctacatatatgacttgatgcgattgcgattggtgaatgagtcttcaggcgat
gatcttcttttggaggtttgcaagcgcagcaatggaatttgcttgcaactatatgagaag
gagctgctgactgattcatcatacctttacatacatgggttgaaagaaaatgacttgagt
gcaaggcagctggcagttcttgctggtctatatcaatggagagatggcgtcgctcgtgct
gaggatgagagcactggttatatattacccaataagactctacttgaaatagccaagcag
atgcctgtgaccactgggaggttaaaaagaacagtgaagtcaaaaaataaatttcttgag
cactatctcggacatgtcattactatcataaggaatgccgtcgcaaatgccgatgctttt
gaaagtatagctgagcaactgaagaagggaaggctggaagagttaatggcggcagaagcg
aaggacggcagtgaagacagtgaaatgattcctgccgtcgatgctgatagtaatgaaagt
aatcttcagctgattgctgaacctgatgtagctcccacagtgattacaaatgtccatact
gcttctttctgtaccgggaatgttacgagcggagcttctttaggtaatttgcaactagat
aacatcacacctgaaaccaagagctttggggcgttgccaggcgctaccgggcaagcagat
acagtgataccgagcaatggtggtggtcagcagcaagtaataaaggcaacagttcaagta
tcgaagagacctacggcttttggtgctctgttaggaaaaccctctaccgcaagaaggcca
aatctatttccaggattttcaagtgaccagaataaaagcaaggtggagaagatcaagtct
tccgtggtactgcctttccatcatttctcaggcggtgcaaatcctccagcaactagccct
ccagtagcaaaatcgtcggaacatgaagcggaaatcatgtgcgaggatcctgtgtctcgg
atggaggaagtgattcagctggacactggaacagatgacccagaaaacggcaacgcagat
ggacagagcgattgcaaacctggagacaccgatgtgtctagctcccctcctgagccttcc
tctggcatcgagcagcgctgcagatccctcgacgagagcagagaccttcaacagaagcac
caagcaccggaagaactggaatttaatgatcagctgaaggccttcgattacgctgaagct
agaaagaatacttcatttggagaagttagatctgagagaagaaaggacaatgcagtggcc
agcgctatcaatgtggattctggagataaacggaaaagtttgaaacaaacccccggtgcc
ggtggcggcgaagaggatgaagggaacttccagaatccacgaaggcgacaggctttccca
ccttctggcaacaggagtgctacgtaccattag
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